Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF138Q8WVD3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF138Q8WVD3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF138Q8WVD3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF138Q8WVD3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF138Q8WVD3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RNF138Q8WVD3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF138Q8WVD3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF138Q8WVD3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF138Q8WVD3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF138Q8WVD3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF138Q8WVD3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF138Q8WVD3 AC019171.1-201ENST00000601251 1056 ntBASIC21.82■■□□□ 1.08
RNF138Q8WVD3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF138Q8WVD3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF138Q8WVD3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF138Q8WVD3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF138Q8WVD3 AC097639.1-201ENST00000565519 1891 ntBASIC21.81■■□□□ 1.08
RNF138Q8WVD3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF138Q8WVD3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF138Q8WVD3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF138Q8WVD3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF138Q8WVD3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF138Q8WVD3 LONRF2P2-201ENST00000439212 571 ntBASIC21.81■■□□□ 1.08
RNF138Q8WVD3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF138Q8WVD3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF138Q8WVD3 AC074183.2-201ENST00000623112 922 ntBASIC21.81■■□□□ 1.08
RNF138Q8WVD3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF138Q8WVD3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF138Q8WVD3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF138Q8WVD3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF138Q8WVD3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF138Q8WVD3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF138Q8WVD3 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF138Q8WVD3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF138Q8WVD3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF138Q8WVD3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF138Q8WVD3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
RNF138Q8WVD3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF138Q8WVD3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF138Q8WVD3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF138Q8WVD3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF138Q8WVD3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF138Q8WVD3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF138Q8WVD3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF138Q8WVD3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF138Q8WVD3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF138Q8WVD3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.75■■□□□ 1.07
RNF138Q8WVD3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
RNF138Q8WVD3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF138Q8WVD3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF138Q8WVD3 PVT1_1.1-201ENST00000615125 194 ntBASIC21.75■■□□□ 1.07
RNF138Q8WVD3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF138Q8WVD3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RNF138Q8WVD3 AC139795.1-202ENST00000500444 432 ntBASIC21.74■■□□□ 1.07
RNF138Q8WVD3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF138Q8WVD3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF138Q8WVD3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF138Q8WVD3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF138Q8WVD3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF138Q8WVD3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF138Q8WVD3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF138Q8WVD3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF138Q8WVD3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF138Q8WVD3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF138Q8WVD3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF138Q8WVD3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF138Q8WVD3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF138Q8WVD3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF138Q8WVD3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF138Q8WVD3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms