Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CT55Q8WUE5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CT55Q8WUE5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CT55Q8WUE5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CT55Q8WUE5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CT55Q8WUE5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.5■■□□□ 1.19
CT55Q8WUE5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CT55Q8WUE5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.5■■□□□ 1.19
CT55Q8WUE5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CT55Q8WUE5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CT55Q8WUE5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CT55Q8WUE5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CT55Q8WUE5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CT55Q8WUE5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CT55Q8WUE5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.49■■□□□ 1.19
CT55Q8WUE5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.49■■□□□ 1.19
CT55Q8WUE5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CT55Q8WUE5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.49■■□□□ 1.19
CT55Q8WUE5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CT55Q8WUE5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CT55Q8WUE5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CT55Q8WUE5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CT55Q8WUE5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CT55Q8WUE5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CT55Q8WUE5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CT55Q8WUE5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.47■■□□□ 1.19
CT55Q8WUE5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CT55Q8WUE5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CT55Q8WUE5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.47■■□□□ 1.19
CT55Q8WUE5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.47■■□□□ 1.19
CT55Q8WUE5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CT55Q8WUE5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.47■■□□□ 1.19
CT55Q8WUE5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CT55Q8WUE5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.46■■□□□ 1.19
CT55Q8WUE5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
CT55Q8WUE5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.46■■□□□ 1.19
CT55Q8WUE5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.46■■□□□ 1.19
CT55Q8WUE5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CT55Q8WUE5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CT55Q8WUE5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CT55Q8WUE5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CT55Q8WUE5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.45■■□□□ 1.18
CT55Q8WUE5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CT55Q8WUE5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CT55Q8WUE5 UNC93B8-201ENST00000511903 705 ntBASIC22.45■■□□□ 1.18
CT55Q8WUE5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.45■■□□□ 1.18
CT55Q8WUE5 AC137630.3-201ENST00000607245 391 ntBASIC22.45■■□□□ 1.18
CT55Q8WUE5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.45■■□□□ 1.18
CT55Q8WUE5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CT55Q8WUE5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.45■■□□□ 1.18
CT55Q8WUE5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CT55Q8WUE5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CT55Q8WUE5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CT55Q8WUE5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CT55Q8WUE5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CT55Q8WUE5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CT55Q8WUE5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CT55Q8WUE5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.44■■□□□ 1.18
CT55Q8WUE5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.44■■□□□ 1.18
CT55Q8WUE5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.44■■□□□ 1.18
CT55Q8WUE5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CT55Q8WUE5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CT55Q8WUE5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.43■■□□□ 1.18
CT55Q8WUE5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CT55Q8WUE5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CT55Q8WUE5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CT55Q8WUE5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CT55Q8WUE5 KRT16P3-201ENST00000439127 1283 ntBASIC22.42■■□□□ 1.18
CT55Q8WUE5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.42■■□□□ 1.18
CT55Q8WUE5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.42■■□□□ 1.18
CT55Q8WUE5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.42■■□□□ 1.18
CT55Q8WUE5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CT55Q8WUE5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CT55Q8WUE5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.41■■□□□ 1.18
CT55Q8WUE5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.41■■□□□ 1.18
CT55Q8WUE5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.41■■□□□ 1.18
CT55Q8WUE5 TSPY9P-201ENST00000440215 945 ntBASIC22.41■■□□□ 1.18
CT55Q8WUE5 TSPY11P-201ENST00000442607 1045 ntBASIC22.41■■□□□ 1.18
CT55Q8WUE5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CT55Q8WUE5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CT55Q8WUE5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
CT55Q8WUE5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CT55Q8WUE5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.4■■□□□ 1.18
CT55Q8WUE5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.4■■□□□ 1.18
CT55Q8WUE5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.4■■□□□ 1.18
CT55Q8WUE5 AC021242.3-201ENST00000607598 1377 ntBASIC22.39■■□□□ 1.18
CT55Q8WUE5 MIR4281-201ENST00000580852 62 ntBASIC22.39■■□□□ 1.17
CT55Q8WUE5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.39■■□□□ 1.17
CT55Q8WUE5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CT55Q8WUE5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CT55Q8WUE5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
CT55Q8WUE5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CT55Q8WUE5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.38■■□□□ 1.17
CT55Q8WUE5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.38■■□□□ 1.17
CT55Q8WUE5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.38■■□□□ 1.17
CT55Q8WUE5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CT55Q8WUE5 AC008406.3-201ENST00000620001 1374 ntBASIC22.38■■□□□ 1.17
CT55Q8WUE5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CT55Q8WUE5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CT55Q8WUE5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms