Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11BQ8TCY0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11BQ8TCY0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11BQ8TCY0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11BQ8TCY0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11BQ8TCY0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.46■□□□□ 0.07
SMIM11BQ8TCY0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11BQ8TCY0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11BQ8TCY0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SMIM11BQ8TCY0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SMIM11BQ8TCY0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC15.46■□□□□ 0.06
SMIM11BQ8TCY0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SMIM11BQ8TCY0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.45■□□□□ 0.06
SMIM11BQ8TCY0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC15.45■□□□□ 0.06
SMIM11BQ8TCY0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SMIM11BQ8TCY0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SMIM11BQ8TCY0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SMIM11BQ8TCY0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SMIM11BQ8TCY0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SMIM11BQ8TCY0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SMIM11BQ8TCY0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
SMIM11BQ8TCY0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 AL391121.1-201ENST00000607967 1349 ntBASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.42■□□□□ 0.06
SMIM11BQ8TCY0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 SETD8P1-201ENST00000623146 1180 ntBASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 AC141586.4-201ENST00000624558 1573 ntBASIC15.41■□□□□ 0.06
SMIM11BQ8TCY0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.4■□□□□ 0.06
SMIM11BQ8TCY0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM11BQ8TCY0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM11BQ8TCY0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM11BQ8TCY0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM11BQ8TCY0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM11BQ8TCY0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC15.38■□□□□ 0.05
SMIM11BQ8TCY0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM11BQ8TCY0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms