Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SETD9Q8NE22 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SETD9Q8NE22 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SETD9Q8NE22 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SETD9Q8NE22 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.85■■□□□ 1.09
SETD9Q8NE22 DUSP8P5-201ENST00000422884 1815 ntBASIC21.85■■□□□ 1.09
SETD9Q8NE22 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SETD9Q8NE22 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SETD9Q8NE22 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.84■■□□□ 1.09
SETD9Q8NE22 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.84■■□□□ 1.09
SETD9Q8NE22 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SETD9Q8NE22 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SETD9Q8NE22 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SETD9Q8NE22 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.84■■□□□ 1.09
SETD9Q8NE22 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SETD9Q8NE22 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SETD9Q8NE22 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.83■■□□□ 1.09
SETD9Q8NE22 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SETD9Q8NE22 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SETD9Q8NE22 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
SETD9Q8NE22 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SETD9Q8NE22 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SETD9Q8NE22 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SETD9Q8NE22 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.82■■□□□ 1.08
SETD9Q8NE22 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SETD9Q8NE22 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SETD9Q8NE22 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SETD9Q8NE22 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.82■■□□□ 1.08
SETD9Q8NE22 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SETD9Q8NE22 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SETD9Q8NE22 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SETD9Q8NE22 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.81■■□□□ 1.08
SETD9Q8NE22 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.81■■□□□ 1.08
SETD9Q8NE22 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SETD9Q8NE22 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SETD9Q8NE22 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.81■■□□□ 1.08
SETD9Q8NE22 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SETD9Q8NE22 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.8■■□□□ 1.08
SETD9Q8NE22 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SETD9Q8NE22 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SETD9Q8NE22 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SETD9Q8NE22 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SETD9Q8NE22 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SETD9Q8NE22 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SETD9Q8NE22 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SETD9Q8NE22 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SETD9Q8NE22 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SETD9Q8NE22 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.79■■□□□ 1.08
SETD9Q8NE22 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SETD9Q8NE22 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SETD9Q8NE22 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SETD9Q8NE22 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SETD9Q8NE22 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SETD9Q8NE22 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.77■■□□□ 1.08
SETD9Q8NE22 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SETD9Q8NE22 SUZ12P1-203ENST00000578195 985 ntBASIC21.77■■□□□ 1.08
SETD9Q8NE22 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SETD9Q8NE22 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SETD9Q8NE22 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SETD9Q8NE22 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SETD9Q8NE22 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SETD9Q8NE22 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SETD9Q8NE22 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SETD9Q8NE22 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SETD9Q8NE22 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SETD9Q8NE22 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.76■■□□□ 1.07
SETD9Q8NE22 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SETD9Q8NE22 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SETD9Q8NE22 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SETD9Q8NE22 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SETD9Q8NE22 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.75■■□□□ 1.07
SETD9Q8NE22 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SETD9Q8NE22 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.75■■□□□ 1.07
SETD9Q8NE22 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.75■■□□□ 1.07
SETD9Q8NE22 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SETD9Q8NE22 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SETD9Q8NE22 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SETD9Q8NE22 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SETD9Q8NE22 SLC6A10P-202ENST00000431994 2058 ntBASIC21.75■■□□□ 1.07
SETD9Q8NE22 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SETD9Q8NE22 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SETD9Q8NE22 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SETD9Q8NE22 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.74■■□□□ 1.07
SETD9Q8NE22 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SETD9Q8NE22 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SETD9Q8NE22 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SETD9Q8NE22 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.73■■□□□ 1.07
SETD9Q8NE22 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SETD9Q8NE22 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SETD9Q8NE22 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SETD9Q8NE22 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SETD9Q8NE22 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SETD9Q8NE22 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SETD9Q8NE22 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SETD9Q8NE22 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SETD9Q8NE22 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.72■■□□□ 1.07
SETD9Q8NE22 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.72■■□□□ 1.07
SETD9Q8NE22 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SETD9Q8NE22 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.72■■□□□ 1.07
SETD9Q8NE22 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms