Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDRT4Q8N9R6 KRT18P10-201ENST00000388836 1287 ntBASIC22.21■■□□□ 1.15
CDRT4Q8N9R6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDRT4Q8N9R6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CDRT4Q8N9R6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.21■■□□□ 1.15
CDRT4Q8N9R6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.21■■□□□ 1.15
CDRT4Q8N9R6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDRT4Q8N9R6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
CDRT4Q8N9R6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDRT4Q8N9R6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDRT4Q8N9R6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.2■■□□□ 1.14
CDRT4Q8N9R6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDRT4Q8N9R6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDRT4Q8N9R6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CDRT4Q8N9R6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDRT4Q8N9R6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDRT4Q8N9R6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.19■■□□□ 1.14
CDRT4Q8N9R6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.19■■□□□ 1.14
CDRT4Q8N9R6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDRT4Q8N9R6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CDRT4Q8N9R6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDRT4Q8N9R6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDRT4Q8N9R6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.17■■□□□ 1.14
CDRT4Q8N9R6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDRT4Q8N9R6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.17■■□□□ 1.14
CDRT4Q8N9R6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDRT4Q8N9R6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDRT4Q8N9R6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CDRT4Q8N9R6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDRT4Q8N9R6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.16■■□□□ 1.14
CDRT4Q8N9R6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CDRT4Q8N9R6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.16■■□□□ 1.14
CDRT4Q8N9R6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.16■■□□□ 1.14
CDRT4Q8N9R6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDRT4Q8N9R6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
CDRT4Q8N9R6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDRT4Q8N9R6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDRT4Q8N9R6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
CDRT4Q8N9R6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 AL592293.1-201ENST00000502889 1188 ntBASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDRT4Q8N9R6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CDRT4Q8N9R6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDRT4Q8N9R6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDRT4Q8N9R6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDRT4Q8N9R6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.12■■□□□ 1.13
CDRT4Q8N9R6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDRT4Q8N9R6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDRT4Q8N9R6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDRT4Q8N9R6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDRT4Q8N9R6 AC142381.3-201ENST00000568208 1670 ntBASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 AC022211.4-201ENST00000625094 2161 ntBASIC22.11■■□□□ 1.13
CDRT4Q8N9R6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDRT4Q8N9R6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDRT4Q8N9R6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CDRT4Q8N9R6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDRT4Q8N9R6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDRT4Q8N9R6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDRT4Q8N9R6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDRT4Q8N9R6 AC018755.3-202ENST00000596210 929 ntBASIC22.09■■□□□ 1.13
CDRT4Q8N9R6 U85056.1-201ENST00000616429 682 ntBASIC22.09■■□□□ 1.13
CDRT4Q8N9R6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDRT4Q8N9R6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDRT4Q8N9R6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
CDRT4Q8N9R6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDRT4Q8N9R6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDRT4Q8N9R6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDRT4Q8N9R6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDRT4Q8N9R6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDRT4Q8N9R6 ABHD17AP5-201ENST00000580133 923 ntBASIC22.08■■□□□ 1.13
CDRT4Q8N9R6 SLC6A10P-202ENST00000431994 2058 ntBASIC22.08■■□□□ 1.12
CDRT4Q8N9R6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.08■■□□□ 1.12
CDRT4Q8N9R6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDRT4Q8N9R6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDRT4Q8N9R6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms