Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PBX2P1-201ENST00000493219 1291 ntBASIC18.78■□□□□ 0.6
C3orf56Q8N813 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C3orf56Q8N813 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C3orf56Q8N813 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C3orf56Q8N813 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C3orf56Q8N813 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.77■□□□□ 0.6
C3orf56Q8N813 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.77■□□□□ 0.6
C3orf56Q8N813 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C3orf56Q8N813 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.77■□□□□ 0.6
C3orf56Q8N813 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
C3orf56Q8N813 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.77■□□□□ 0.6
C3orf56Q8N813 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.77■□□□□ 0.59
C3orf56Q8N813 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C3orf56Q8N813 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.76■□□□□ 0.59
C3orf56Q8N813 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C3orf56Q8N813 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
C3orf56Q8N813 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
C3orf56Q8N813 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.76■□□□□ 0.59
C3orf56Q8N813 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.76■□□□□ 0.59
C3orf56Q8N813 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.76■□□□□ 0.59
C3orf56Q8N813 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C3orf56Q8N813 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.75■□□□□ 0.59
C3orf56Q8N813 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C3orf56Q8N813 MIR4281-201ENST00000580852 62 ntBASIC18.75■□□□□ 0.59
C3orf56Q8N813 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C3orf56Q8N813 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.75■□□□□ 0.59
C3orf56Q8N813 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.74■□□□□ 0.59
C3orf56Q8N813 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C3orf56Q8N813 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
C3orf56Q8N813 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.74■□□□□ 0.59
C3orf56Q8N813 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C3orf56Q8N813 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C3orf56Q8N813 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C3orf56Q8N813 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C3orf56Q8N813 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.73■□□□□ 0.59
C3orf56Q8N813 AC106739.1-201ENST00000617035 715 ntBASIC18.73■□□□□ 0.59
C3orf56Q8N813 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
C3orf56Q8N813 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.73■□□□□ 0.59
C3orf56Q8N813 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.73■□□□□ 0.59
C3orf56Q8N813 AL139393.2-201ENST00000608721 2025 ntBASIC18.73■□□□□ 0.59
C3orf56Q8N813 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C3orf56Q8N813 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
C3orf56Q8N813 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C3orf56Q8N813 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
C3orf56Q8N813 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
C3orf56Q8N813 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.72■□□□□ 0.59
C3orf56Q8N813 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.72■□□□□ 0.59
C3orf56Q8N813 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
C3orf56Q8N813 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.72■□□□□ 0.59
C3orf56Q8N813 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
C3orf56Q8N813 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
C3orf56Q8N813 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C3orf56Q8N813 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.71■□□□□ 0.59
C3orf56Q8N813 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.71■□□□□ 0.59
C3orf56Q8N813 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.71■□□□□ 0.59
C3orf56Q8N813 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.71■□□□□ 0.59
C3orf56Q8N813 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C3orf56Q8N813 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.71■□□□□ 0.59
C3orf56Q8N813 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C3orf56Q8N813 AC135279.3-201ENST00000610945 1311 ntBASIC18.71■□□□□ 0.59
C3orf56Q8N813 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
C3orf56Q8N813 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C3orf56Q8N813 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C3orf56Q8N813 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.7■□□□□ 0.58
C3orf56Q8N813 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.7■□□□□ 0.58
C3orf56Q8N813 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C3orf56Q8N813 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C3orf56Q8N813 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.7■□□□□ 0.58
C3orf56Q8N813 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C3orf56Q8N813 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C3orf56Q8N813 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
C3orf56Q8N813 AC026271.2-201ENST00000428091 497 ntBASIC18.69■□□□□ 0.58
C3orf56Q8N813 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.69■□□□□ 0.58
C3orf56Q8N813 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.69■□□□□ 0.58
C3orf56Q8N813 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
C3orf56Q8N813 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C3orf56Q8N813 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C3orf56Q8N813 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.68■□□□□ 0.58
C3orf56Q8N813 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
C3orf56Q8N813 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C3orf56Q8N813 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.67■□□□□ 0.58
C3orf56Q8N813 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.67■□□□□ 0.58
C3orf56Q8N813 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.67■□□□□ 0.58
C3orf56Q8N813 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
C3orf56Q8N813 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf56Q8N813 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
C3orf56Q8N813 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
C3orf56Q8N813 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf56Q8N813 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
C3orf56Q8N813 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf56Q8N813 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C3orf56Q8N813 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C3orf56Q8N813 AL512631.2-201ENST00000604634 923 ntBASIC18.66■□□□□ 0.58
C3orf56Q8N813 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf56Q8N813 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.65■□□□□ 0.58
C3orf56Q8N813 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.65■□□□□ 0.58
C3orf56Q8N813 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.65■□□□□ 0.58
C3orf56Q8N813 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf56Q8N813 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
C3orf56Q8N813 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms