Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.71■■□□□ 1.07
CLDN22Q8N7P3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN22Q8N7P3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.71■■□□□ 1.07
CLDN22Q8N7P3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN22Q8N7P3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN22Q8N7P3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.71■■□□□ 1.07
CLDN22Q8N7P3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN22Q8N7P3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN22Q8N7P3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN22Q8N7P3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN22Q8N7P3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN22Q8N7P3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CLDN22Q8N7P3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN22Q8N7P3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN22Q8N7P3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN22Q8N7P3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN22Q8N7P3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN22Q8N7P3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN22Q8N7P3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN22Q8N7P3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN22Q8N7P3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN22Q8N7P3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN22Q8N7P3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN22Q8N7P3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN22Q8N7P3 AP003733.4-201ENST00000623785 1697 ntBASIC21.68■■□□□ 1.06
CLDN22Q8N7P3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN22Q8N7P3 AC097639.1-201ENST00000565519 1891 ntBASIC21.68■■□□□ 1.06
CLDN22Q8N7P3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLDN22Q8N7P3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 MIR639-201ENST00000384974 98 ntBASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN22Q8N7P3 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN22Q8N7P3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN22Q8N7P3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN22Q8N7P3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN22Q8N7P3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN22Q8N7P3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN22Q8N7P3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.64■■□□□ 1.06
CLDN22Q8N7P3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN22Q8N7P3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN22Q8N7P3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.64■■□□□ 1.05
CLDN22Q8N7P3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CLDN22Q8N7P3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CLDN22Q8N7P3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CLDN22Q8N7P3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN22Q8N7P3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN22Q8N7P3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN22Q8N7P3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN22Q8N7P3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN22Q8N7P3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CLDN22Q8N7P3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.61■■□□□ 1.05
CLDN22Q8N7P3 AL157400.5-201ENST00000507624 621 ntBASIC21.6■■□□□ 1.05
CLDN22Q8N7P3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN22Q8N7P3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN22Q8N7P3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.59■■□□□ 1.05
CLDN22Q8N7P3 AC012676.1-201ENST00000574705 1949 ntBASIC21.59■■□□□ 1.05
CLDN22Q8N7P3 SLC6A10P-202ENST00000431994 2058 ntBASIC21.59■■□□□ 1.05
CLDN22Q8N7P3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN22Q8N7P3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN22Q8N7P3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms