Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TTC39CQ8N584 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.48■■□□□ 1.67
TTC39CQ8N584 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.48■■□□□ 1.67
TTC39CQ8N584 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
TTC39CQ8N584 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
TTC39CQ8N584 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TTC39CQ8N584 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.47■■□□□ 1.67
TTC39CQ8N584 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
TTC39CQ8N584 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.47■■□□□ 1.67
TTC39CQ8N584 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TTC39CQ8N584 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
TTC39CQ8N584 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TTC39CQ8N584 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.47■■□□□ 1.67
TTC39CQ8N584 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC39CQ8N584 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.46■■□□□ 1.67
TTC39CQ8N584 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.46■■□□□ 1.67
TTC39CQ8N584 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC39CQ8N584 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
TTC39CQ8N584 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
TTC39CQ8N584 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TTC39CQ8N584 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TTC39CQ8N584 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
TTC39CQ8N584 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
TTC39CQ8N584 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TTC39CQ8N584 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.44■■□□□ 1.66
TTC39CQ8N584 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TTC39CQ8N584 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
TTC39CQ8N584 AC074183.2-201ENST00000623112 922 ntBASIC25.44■■□□□ 1.66
TTC39CQ8N584 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TTC39CQ8N584 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39CQ8N584 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
TTC39CQ8N584 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39CQ8N584 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.43■■□□□ 1.66
TTC39CQ8N584 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
TTC39CQ8N584 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.43■■□□□ 1.66
TTC39CQ8N584 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.43■■□□□ 1.66
TTC39CQ8N584 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.43■■□□□ 1.66
TTC39CQ8N584 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
TTC39CQ8N584 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39CQ8N584 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.42■■□□□ 1.66
TTC39CQ8N584 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC39CQ8N584 DUX4L18-201ENST00000553347 1267 ntBASIC25.42■■□□□ 1.66
TTC39CQ8N584 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39CQ8N584 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39CQ8N584 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
TTC39CQ8N584 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39CQ8N584 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39CQ8N584 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.41■■□□□ 1.66
TTC39CQ8N584 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
TTC39CQ8N584 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.41■■□□□ 1.66
TTC39CQ8N584 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39CQ8N584 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TTC39CQ8N584 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
TTC39CQ8N584 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
TTC39CQ8N584 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC39CQ8N584 AC139795.1-202ENST00000500444 432 ntBASIC25.4■■□□□ 1.66
TTC39CQ8N584 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC39CQ8N584 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39CQ8N584 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.39■■□□□ 1.66
TTC39CQ8N584 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.39■■□□□ 1.66
TTC39CQ8N584 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC39CQ8N584 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.39■■□□□ 1.66
TTC39CQ8N584 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
TTC39CQ8N584 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39CQ8N584 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39CQ8N584 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.38■■□□□ 1.65
TTC39CQ8N584 AC019171.1-201ENST00000601251 1056 ntBASIC25.38■■□□□ 1.65
TTC39CQ8N584 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TTC39CQ8N584 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC39CQ8N584 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
TTC39CQ8N584 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39CQ8N584 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39CQ8N584 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39CQ8N584 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.37■■□□□ 1.65
TTC39CQ8N584 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
TTC39CQ8N584 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39CQ8N584 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39CQ8N584 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39CQ8N584 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC39CQ8N584 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.36■■□□□ 1.65
TTC39CQ8N584 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.36■■□□□ 1.65
TTC39CQ8N584 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TTC39CQ8N584 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.36■■□□□ 1.65
TTC39CQ8N584 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC39CQ8N584 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.36■■□□□ 1.65
TTC39CQ8N584 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC39CQ8N584 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39CQ8N584 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39CQ8N584 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TTC39CQ8N584 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39CQ8N584 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.35■■□□□ 1.65
TTC39CQ8N584 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39CQ8N584 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39CQ8N584 LONRF2P2-201ENST00000439212 571 ntBASIC25.35■■□□□ 1.65
TTC39CQ8N584 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39CQ8N584 AL033527.3-201ENST00000566366 1196 ntBASIC25.35■■□□□ 1.65
TTC39CQ8N584 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.35■■□□□ 1.65
TTC39CQ8N584 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.35■■□□□ 1.65
TTC39CQ8N584 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC39CQ8N584 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms