Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC146Q8IYE0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC146Q8IYE0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
CCDC146Q8IYE0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC146Q8IYE0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.75■■■□□ 2.67
CCDC146Q8IYE0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC146Q8IYE0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC146Q8IYE0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC146Q8IYE0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC146Q8IYE0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC146Q8IYE0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.73■■■□□ 2.67
CCDC146Q8IYE0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CCDC146Q8IYE0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.73■■■□□ 2.67
CCDC146Q8IYE0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC146Q8IYE0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC146Q8IYE0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.72■■■□□ 2.67
CCDC146Q8IYE0 TSPY13P-201ENST00000338964 914 ntBASIC31.72■■■□□ 2.67
CCDC146Q8IYE0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC146Q8IYE0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC146Q8IYE0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC146Q8IYE0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC146Q8IYE0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC146Q8IYE0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC146Q8IYE0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC146Q8IYE0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.7■■■□□ 2.67
CCDC146Q8IYE0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC146Q8IYE0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.7■■■□□ 2.66
CCDC146Q8IYE0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC146Q8IYE0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC146Q8IYE0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC146Q8IYE0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.68■■■□□ 2.66
CCDC146Q8IYE0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC146Q8IYE0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC146Q8IYE0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC146Q8IYE0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.67■■■□□ 2.66
CCDC146Q8IYE0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC146Q8IYE0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC146Q8IYE0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC146Q8IYE0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CCDC146Q8IYE0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.66■■■□□ 2.66
CCDC146Q8IYE0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.66■■■□□ 2.66
CCDC146Q8IYE0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC146Q8IYE0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC146Q8IYE0 RPS2P7-201ENST00000447334 885 ntBASIC31.65■■■□□ 2.66
CCDC146Q8IYE0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
CCDC146Q8IYE0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.64■■■□□ 2.66
CCDC146Q8IYE0 AC097639.1-201ENST00000565519 1891 ntBASIC31.64■■■□□ 2.66
CCDC146Q8IYE0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC146Q8IYE0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC146Q8IYE0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC146Q8IYE0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC146Q8IYE0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC146Q8IYE0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.63■■■□□ 2.65
CCDC146Q8IYE0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.63■■■□□ 2.65
CCDC146Q8IYE0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC146Q8IYE0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.63■■■□□ 2.65
CCDC146Q8IYE0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC146Q8IYE0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.62■■■□□ 2.65
CCDC146Q8IYE0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC146Q8IYE0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.62■■■□□ 2.65
CCDC146Q8IYE0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.62■■■□□ 2.65
CCDC146Q8IYE0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC146Q8IYE0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC146Q8IYE0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC146Q8IYE0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC146Q8IYE0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC146Q8IYE0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC146Q8IYE0 AC087393.1-201ENST00000582896 145 ntBASIC31.61■■■□□ 2.65
CCDC146Q8IYE0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC146Q8IYE0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.6■■■□□ 2.65
CCDC146Q8IYE0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC146Q8IYE0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC146Q8IYE0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC146Q8IYE0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC146Q8IYE0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.59■■■□□ 2.65
CCDC146Q8IYE0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC146Q8IYE0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC146Q8IYE0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC146Q8IYE0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC146Q8IYE0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC146Q8IYE0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.58■■■□□ 2.65
CCDC146Q8IYE0 AC020928.2-201ENST00000588717 2197 ntBASIC31.57■■■□□ 2.64
CCDC146Q8IYE0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms