Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RP1L1Q8IWN7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 MIR4281-201ENST00000580852 62 ntBASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 BX255925.1-201ENST00000566954 1854 ntBASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 AL136116.3-201ENST00000402907 1138 ntBASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 AL356740.2-201ENST00000601559 647 ntBASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 AL449106.1-201ENST00000608517 1980 ntBASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RP1L1Q8IWN7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RP1L1Q8IWN7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RP1L1Q8IWN7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.68■■□□□ 1.06
RP1L1Q8IWN7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RP1L1Q8IWN7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.68■■□□□ 1.06
RP1L1Q8IWN7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.68■■□□□ 1.06
RP1L1Q8IWN7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RP1L1Q8IWN7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RP1L1Q8IWN7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RP1L1Q8IWN7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RP1L1Q8IWN7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RP1L1Q8IWN7 ZNRF2P3-201ENST00000424200 374 ntBASIC21.67■■□□□ 1.06
RP1L1Q8IWN7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.67■■□□□ 1.06
RP1L1Q8IWN7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RP1L1Q8IWN7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.67■■□□□ 1.06
RP1L1Q8IWN7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
RP1L1Q8IWN7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RP1L1Q8IWN7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.65■■□□□ 1.06
RP1L1Q8IWN7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.65■■□□□ 1.06
RP1L1Q8IWN7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RP1L1Q8IWN7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RP1L1Q8IWN7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RP1L1Q8IWN7 AC096631.2-201ENST00000436136 790 ntBASIC21.65■■□□□ 1.06
RP1L1Q8IWN7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.65■■□□□ 1.06
RP1L1Q8IWN7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RP1L1Q8IWN7 AC120024.1-201ENST00000562672 995 ntBASIC21.64■■□□□ 1.05
RP1L1Q8IWN7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RP1L1Q8IWN7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RP1L1Q8IWN7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.64■■□□□ 1.05
RP1L1Q8IWN7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RP1L1Q8IWN7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.63■■□□□ 1.05
RP1L1Q8IWN7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.63■■□□□ 1.05
RP1L1Q8IWN7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RP1L1Q8IWN7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RP1L1Q8IWN7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RP1L1Q8IWN7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RP1L1Q8IWN7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RP1L1Q8IWN7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RP1L1Q8IWN7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.61■■□□□ 1.05
RP1L1Q8IWN7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RP1L1Q8IWN7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
RP1L1Q8IWN7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RP1L1Q8IWN7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RP1L1Q8IWN7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.6■■□□□ 1.05
RP1L1Q8IWN7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RP1L1Q8IWN7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RP1L1Q8IWN7 DRD5P2-201ENST00000421395 2012 ntBASIC21.59■■□□□ 1.05
RP1L1Q8IWN7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RP1L1Q8IWN7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.58■■□□□ 1.05
RP1L1Q8IWN7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RP1L1Q8IWN7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.58■■□□□ 1.05
RP1L1Q8IWN7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.58■■□□□ 1.05
RP1L1Q8IWN7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RP1L1Q8IWN7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RP1L1Q8IWN7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.58■■□□□ 1.05
RP1L1Q8IWN7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RP1L1Q8IWN7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms