Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRRTM4Q86VH4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.52■■□□□ 1.36
LRRTM4Q86VH4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRTM4Q86VH4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRTM4Q86VH4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
LRRTM4Q86VH4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRRTM4Q86VH4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRTM4Q86VH4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRTM4Q86VH4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.5■■□□□ 1.35
LRRTM4Q86VH4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LRRTM4Q86VH4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRTM4Q86VH4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.5■■□□□ 1.35
LRRTM4Q86VH4 LONRF2P2-201ENST00000439212 571 ntBASIC23.5■■□□□ 1.35
LRRTM4Q86VH4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRTM4Q86VH4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRTM4Q86VH4 PVT1_1.1-201ENST00000615125 194 ntBASIC23.5■■□□□ 1.35
LRRTM4Q86VH4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LRRTM4Q86VH4 AC096887.2-201ENST00000623443 1957 ntBASIC23.49■■□□□ 1.35
LRRTM4Q86VH4 AC019171.1-201ENST00000601251 1056 ntBASIC23.49■■□□□ 1.35
LRRTM4Q86VH4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
LRRTM4Q86VH4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.49■■□□□ 1.35
LRRTM4Q86VH4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LRRTM4Q86VH4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRTM4Q86VH4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.48■■□□□ 1.35
LRRTM4Q86VH4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRTM4Q86VH4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRTM4Q86VH4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRTM4Q86VH4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRTM4Q86VH4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.48■■□□□ 1.35
LRRTM4Q86VH4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRTM4Q86VH4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.47■■□□□ 1.35
LRRTM4Q86VH4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRTM4Q86VH4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRTM4Q86VH4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LRRTM4Q86VH4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRTM4Q86VH4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.46■■□□□ 1.35
LRRTM4Q86VH4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LRRTM4Q86VH4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.46■■□□□ 1.35
LRRTM4Q86VH4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.46■■□□□ 1.35
LRRTM4Q86VH4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
LRRTM4Q86VH4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.46■■□□□ 1.35
LRRTM4Q86VH4 AC091060.1-201ENST00000623524 1766 ntBASIC23.46■■□□□ 1.35
LRRTM4Q86VH4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
LRRTM4Q86VH4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
LRRTM4Q86VH4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 KRT8P33-201ENST00000508125 1423 ntBASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 RARRES2P1-201ENST00000474487 481 ntBASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LRRTM4Q86VH4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
LRRTM4Q86VH4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.44■■□□□ 1.34
LRRTM4Q86VH4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LRRTM4Q86VH4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
LRRTM4Q86VH4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
LRRTM4Q86VH4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
LRRTM4Q86VH4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRTM4Q86VH4 DUSP8P4-201ENST00000399538 1761 ntBASIC23.43■■□□□ 1.34
LRRTM4Q86VH4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRTM4Q86VH4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.43■■□□□ 1.34
LRRTM4Q86VH4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRTM4Q86VH4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
LRRTM4Q86VH4 YBX1P4-201ENST00000392794 808 ntBASIC23.42■■□□□ 1.34
LRRTM4Q86VH4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LRRTM4Q86VH4 MIR4508-201ENST00000584178 70 ntBASIC23.42■■□□□ 1.34
LRRTM4Q86VH4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.42■■□□□ 1.34
LRRTM4Q86VH4 AC145676.1-201ENST00000514988 2004 ntBASIC23.42■■□□□ 1.34
LRRTM4Q86VH4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
LRRTM4Q86VH4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.41■■□□□ 1.34
LRRTM4Q86VH4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LRRTM4Q86VH4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
LRRTM4Q86VH4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.41■■□□□ 1.34
LRRTM4Q86VH4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LRRTM4Q86VH4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LRRTM4Q86VH4 AC097639.1-201ENST00000565519 1891 ntBASIC23.41■■□□□ 1.34
LRRTM4Q86VH4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.4■■□□□ 1.34
LRRTM4Q86VH4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.4■■□□□ 1.34
LRRTM4Q86VH4 AC103834.1-201ENST00000520383 144 ntBASIC23.4■■□□□ 1.34
LRRTM4Q86VH4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms