Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSMD2Q7Z408 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.54■□□□□ 0.88
CSMD2Q7Z408 MIR6724-1-201ENST00000616420 92 ntBASIC20.54■□□□□ 0.88
CSMD2Q7Z408 MIR6724-2-201ENST00000616483 92 ntBASIC20.54■□□□□ 0.88
CSMD2Q7Z408 MIR6724-4-201ENST00000617390 92 ntBASIC20.54■□□□□ 0.88
CSMD2Q7Z408 MIR6724-3-201ENST00000622482 92 ntBASIC20.54■□□□□ 0.88
CSMD2Q7Z408 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSMD2Q7Z408 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSMD2Q7Z408 AC120024.1-201ENST00000562672 995 ntBASIC20.53■□□□□ 0.88
CSMD2Q7Z408 AC010997.5-201ENST00000609182 354 ntBASIC20.53■□□□□ 0.88
CSMD2Q7Z408 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CSMD2Q7Z408 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSMD2Q7Z408 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CSMD2Q7Z408 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.53■□□□□ 0.88
CSMD2Q7Z408 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.53■□□□□ 0.88
CSMD2Q7Z408 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.52■□□□□ 0.88
CSMD2Q7Z408 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSMD2Q7Z408 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSMD2Q7Z408 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.52■□□□□ 0.88
CSMD2Q7Z408 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CSMD2Q7Z408 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD2Q7Z408 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CSMD2Q7Z408 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD2Q7Z408 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD2Q7Z408 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.51■□□□□ 0.87
CSMD2Q7Z408 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.51■□□□□ 0.87
CSMD2Q7Z408 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CSMD2Q7Z408 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CSMD2Q7Z408 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.5■□□□□ 0.87
CSMD2Q7Z408 AL355001.2-201ENST00000620617 1191 ntBASIC20.5■□□□□ 0.87
CSMD2Q7Z408 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.5■□□□□ 0.87
CSMD2Q7Z408 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSMD2Q7Z408 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CSMD2Q7Z408 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.5■□□□□ 0.87
CSMD2Q7Z408 PBX2P1-201ENST00000493219 1291 ntBASIC20.5■□□□□ 0.87
CSMD2Q7Z408 AC087623.3-201ENST00000607047 1098 ntBASIC20.5■□□□□ 0.87
CSMD2Q7Z408 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.5■□□□□ 0.87
CSMD2Q7Z408 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSMD2Q7Z408 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CSMD2Q7Z408 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.48■□□□□ 0.87
CSMD2Q7Z408 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.48■□□□□ 0.87
CSMD2Q7Z408 ABCB10P1-201ENST00000614297 2181 ntBASIC20.48■□□□□ 0.87
CSMD2Q7Z408 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CSMD2Q7Z408 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.48■□□□□ 0.87
CSMD2Q7Z408 MIR4281-201ENST00000580852 62 ntBASIC20.47■□□□□ 0.87
CSMD2Q7Z408 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSMD2Q7Z408 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSMD2Q7Z408 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSMD2Q7Z408 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.47■□□□□ 0.87
CSMD2Q7Z408 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSMD2Q7Z408 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSMD2Q7Z408 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.46■□□□□ 0.87
CSMD2Q7Z408 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CSMD2Q7Z408 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSMD2Q7Z408 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSMD2Q7Z408 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD2Q7Z408 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD2Q7Z408 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD2Q7Z408 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD2Q7Z408 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD2Q7Z408 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD2Q7Z408 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSMD2Q7Z408 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.44■□□□□ 0.86
CSMD2Q7Z408 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSMD2Q7Z408 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSMD2Q7Z408 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CSMD2Q7Z408 AC139426.1-201ENST00000568218 2529 ntBASIC20.44■□□□□ 0.86
CSMD2Q7Z408 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CSMD2Q7Z408 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.43■□□□□ 0.86
CSMD2Q7Z408 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CSMD2Q7Z408 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD2Q7Z408 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD2Q7Z408 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD2Q7Z408 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.43■□□□□ 0.86
CSMD2Q7Z408 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD2Q7Z408 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD2Q7Z408 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSMD2Q7Z408 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms