Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM88Q6PEY1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
TMEM88Q6PEY1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88Q6PEY1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TMEM88Q6PEY1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM88Q6PEY1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88Q6PEY1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM88Q6PEY1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM88Q6PEY1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM88Q6PEY1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM88Q6PEY1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM88Q6PEY1 LINC01124-201ENST00000409786 2117 ntBASIC19.08■□□□□ 0.64
TMEM88Q6PEY1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88Q6PEY1 C1orf229-201ENST00000623686 2258 ntBASIC19.08■□□□□ 0.64
TMEM88Q6PEY1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88Q6PEY1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88Q6PEY1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM88Q6PEY1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TMEM88Q6PEY1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88Q6PEY1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88Q6PEY1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88Q6PEY1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 EP400NL-214ENST00000641289 2402 ntBASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.06■□□□□ 0.64
TMEM88Q6PEY1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 AC100797.4-201ENST00000631653 1827 ntBASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88Q6PEY1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM88Q6PEY1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88Q6PEY1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88Q6PEY1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TMEM88Q6PEY1 RPS2P35-201ENST00000443417 897 ntBASIC19.03■□□□□ 0.64
TMEM88Q6PEY1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM88Q6PEY1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM88Q6PEY1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TMEM88Q6PEY1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.03■□□□□ 0.64
TMEM88Q6PEY1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 AP006261.1-201ENST00000584783 668 ntBASIC19.02■□□□□ 0.64
TMEM88Q6PEY1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 PKD1P6-201ENST00000343738 4769 ntBASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 RNF165-205ENST00000588679 2904 ntBASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM88Q6PEY1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TMEM88Q6PEY1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TMEM88Q6PEY1 WHAMMP3-201ENST00000611636 1609 ntBASIC19■□□□□ 0.63
TMEM88Q6PEY1 AP002414.2-202ENST00000590929 1450 ntBASIC19■□□□□ 0.63
TMEM88Q6PEY1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM88Q6PEY1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 AL162393.1-201ENST00000437852 946 ntBASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 AP004609.3-201ENST00000610705 1884 ntBASIC18.99■□□□□ 0.63
TMEM88Q6PEY1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88Q6PEY1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88Q6PEY1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88Q6PEY1 MIR762-201ENST00000390236 83 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms