Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
NFRKBQ6P4R8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27■■□□□ 1.91
NFRKBQ6P4R8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NFRKBQ6P4R8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27■■□□□ 1.91
NFRKBQ6P4R8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27■■□□□ 1.91
NFRKBQ6P4R8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
NFRKBQ6P4R8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
NFRKBQ6P4R8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27■■□□□ 1.91
NFRKBQ6P4R8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
NFRKBQ6P4R8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
NFRKBQ6P4R8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.99■■□□□ 1.91
NFRKBQ6P4R8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.99■■□□□ 1.91
NFRKBQ6P4R8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.99■■□□□ 1.91
NFRKBQ6P4R8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.99■■□□□ 1.91
NFRKBQ6P4R8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
NFRKBQ6P4R8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
NFRKBQ6P4R8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
NFRKBQ6P4R8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NFRKBQ6P4R8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NFRKBQ6P4R8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.98■■□□□ 1.91
NFRKBQ6P4R8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
NFRKBQ6P4R8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
NFRKBQ6P4R8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NFRKBQ6P4R8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.98■■□□□ 1.91
NFRKBQ6P4R8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NFRKBQ6P4R8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NFRKBQ6P4R8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NFRKBQ6P4R8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NFRKBQ6P4R8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.96■■□□□ 1.91
NFRKBQ6P4R8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
NFRKBQ6P4R8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.96■■□□□ 1.91
NFRKBQ6P4R8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
NFRKBQ6P4R8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NFRKBQ6P4R8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
NFRKBQ6P4R8 AC022616.5-201ENST00000518796 181 ntBASIC26.95■■□□□ 1.9
NFRKBQ6P4R8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
NFRKBQ6P4R8 AC135731.1-201ENST00000569415 2548 ntBASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
NFRKBQ6P4R8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
NFRKBQ6P4R8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NFRKBQ6P4R8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NFRKBQ6P4R8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.93■■□□□ 1.9
NFRKBQ6P4R8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
NFRKBQ6P4R8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 AC019069.1-201ENST00000610008 1333 ntBASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NFRKBQ6P4R8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
NFRKBQ6P4R8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
NFRKBQ6P4R8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
NFRKBQ6P4R8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.9■■□□□ 1.9
NFRKBQ6P4R8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NFRKBQ6P4R8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NFRKBQ6P4R8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
NFRKBQ6P4R8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NFRKBQ6P4R8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NFRKBQ6P4R8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.9■■□□□ 1.9
NFRKBQ6P4R8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NFRKBQ6P4R8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
NFRKBQ6P4R8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NFRKBQ6P4R8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.88■■□□□ 1.89
NFRKBQ6P4R8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.88■■□□□ 1.89
NFRKBQ6P4R8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NFRKBQ6P4R8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
NFRKBQ6P4R8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.88■■□□□ 1.89
NFRKBQ6P4R8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
NFRKBQ6P4R8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NFRKBQ6P4R8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
NFRKBQ6P4R8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.87■■□□□ 1.89
NFRKBQ6P4R8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
NFRKBQ6P4R8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NFRKBQ6P4R8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NFRKBQ6P4R8 AC142472.1-201ENST00000612013 1741 ntBASIC26.87■■□□□ 1.89
NFRKBQ6P4R8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.86■■□□□ 1.89
NFRKBQ6P4R8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NFRKBQ6P4R8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
NFRKBQ6P4R8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.86■■□□□ 1.89
NFRKBQ6P4R8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NFRKBQ6P4R8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.86■■□□□ 1.89
NFRKBQ6P4R8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.86■■□□□ 1.89
NFRKBQ6P4R8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
NFRKBQ6P4R8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
NFRKBQ6P4R8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.85■■□□□ 1.89
NFRKBQ6P4R8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
NFRKBQ6P4R8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms