Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.38■□□□□ 0.85
ARFGEF3Q5TH69 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.38■□□□□ 0.85
ARFGEF3Q5TH69 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.38■□□□□ 0.85
ARFGEF3Q5TH69 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.38■□□□□ 0.85
ARFGEF3Q5TH69 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARFGEF3Q5TH69 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARFGEF3Q5TH69 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARFGEF3Q5TH69 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
ARFGEF3Q5TH69 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARFGEF3Q5TH69 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ARFGEF3Q5TH69 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARFGEF3Q5TH69 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARFGEF3Q5TH69 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
ARFGEF3Q5TH69 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ARFGEF3Q5TH69 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARFGEF3Q5TH69 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 AL031848.2-201ENST00000607670 837 ntBASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.35■□□□□ 0.85
ARFGEF3Q5TH69 Z92544.1-202ENST00000571933 1220 ntBASIC20.34■□□□□ 0.85
ARFGEF3Q5TH69 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARFGEF3Q5TH69 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ARFGEF3Q5TH69 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARFGEF3Q5TH69 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ARFGEF3Q5TH69 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ARFGEF3Q5TH69 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ARFGEF3Q5TH69 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGEF3Q5TH69 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGEF3Q5TH69 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ARFGEF3Q5TH69 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.33■□□□□ 0.85
ARFGEF3Q5TH69 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.33■□□□□ 0.85
ARFGEF3Q5TH69 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ARFGEF3Q5TH69 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ARFGEF3Q5TH69 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.33■□□□□ 0.84
ARFGEF3Q5TH69 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.32■□□□□ 0.84
ARFGEF3Q5TH69 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.32■□□□□ 0.84
ARFGEF3Q5TH69 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.32■□□□□ 0.84
ARFGEF3Q5TH69 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARFGEF3Q5TH69 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.31■□□□□ 0.84
ARFGEF3Q5TH69 LONRF2P2-201ENST00000439212 571 ntBASIC20.31■□□□□ 0.84
ARFGEF3Q5TH69 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.31■□□□□ 0.84
ARFGEF3Q5TH69 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.31■□□□□ 0.84
ARFGEF3Q5TH69 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.31■□□□□ 0.84
ARFGEF3Q5TH69 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGEF3Q5TH69 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.31■□□□□ 0.84
ARFGEF3Q5TH69 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGEF3Q5TH69 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGEF3Q5TH69 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGEF3Q5TH69 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.3■□□□□ 0.84
ARFGEF3Q5TH69 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGEF3Q5TH69 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGEF3Q5TH69 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.29■□□□□ 0.84
ARFGEF3Q5TH69 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGEF3Q5TH69 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ARFGEF3Q5TH69 ERN1-208ENST00000606895 2068 ntBASIC20.29■□□□□ 0.84
ARFGEF3Q5TH69 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGEF3Q5TH69 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGEF3Q5TH69 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARFGEF3Q5TH69 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARFGEF3Q5TH69 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 AC131212.1-201ENST00000613771 668 ntBASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.27■□□□□ 0.84
ARFGEF3Q5TH69 KRT18P24-201ENST00000344739 1156 ntBASIC20.27■□□□□ 0.83
ARFGEF3Q5TH69 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.27■□□□□ 0.83
ARFGEF3Q5TH69 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.27■□□□□ 0.83
ARFGEF3Q5TH69 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.27■□□□□ 0.83
ARFGEF3Q5TH69 MIR4281-201ENST00000580852 62 ntBASIC20.27■□□□□ 0.83
ARFGEF3Q5TH69 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
ARFGEF3Q5TH69 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ARFGEF3Q5TH69 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms