Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 ECEL1P2-201ENST00000461596 1295 ntBASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.56■□□□□ 0.88
ATPAF1Q5TC12 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 AL157400.5-201ENST00000507624 621 ntBASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATPAF1Q5TC12 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATPAF1Q5TC12 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATPAF1Q5TC12 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATPAF1Q5TC12 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.54■□□□□ 0.88
ATPAF1Q5TC12 AL139125.2-201ENST00000623134 1869 ntBASIC20.54■□□□□ 0.88
ATPAF1Q5TC12 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 AL359504.2-201ENST00000605506 1601 ntBASIC20.53■□□□□ 0.88
ATPAF1Q5TC12 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.52■□□□□ 0.88
ATPAF1Q5TC12 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATPAF1Q5TC12 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATPAF1Q5TC12 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ATPAF1Q5TC12 AC010501.1-201ENST00000606270 1962 ntBASIC20.52■□□□□ 0.88
ATPAF1Q5TC12 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.52■□□□□ 0.88
ATPAF1Q5TC12 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATPAF1Q5TC12 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATPAF1Q5TC12 RNF126P1-201ENST00000567452 1320 ntBASIC20.52■□□□□ 0.87
ATPAF1Q5TC12 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATPAF1Q5TC12 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATPAF1Q5TC12 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.51■□□□□ 0.87
ATPAF1Q5TC12 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.51■□□□□ 0.87
ATPAF1Q5TC12 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ATPAF1Q5TC12 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATPAF1Q5TC12 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ATPAF1Q5TC12 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 AC025884.2-201ENST00000553429 711 ntBASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 HSD17B1P1-201ENST00000590052 955 ntBASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 AC138932.3-201ENST00000567634 1902 ntBASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF1Q5TC12 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
ATPAF1Q5TC12 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF1Q5TC12 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.49■□□□□ 0.87
ATPAF1Q5TC12 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.49■□□□□ 0.87
ATPAF1Q5TC12 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF1Q5TC12 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 SMPD5-203ENST00000639008 1464 ntBASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 AC022211.4-201ENST00000625094 2161 ntBASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF1Q5TC12 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF1Q5TC12 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.47■□□□□ 0.87
ATPAF1Q5TC12 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF1Q5TC12 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.47■□□□□ 0.87
ATPAF1Q5TC12 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF1Q5TC12 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ATPAF1Q5TC12 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF1Q5TC12 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF1Q5TC12 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF1Q5TC12 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF1Q5TC12 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.46■□□□□ 0.87
ATPAF1Q5TC12 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.46■□□□□ 0.87
ATPAF1Q5TC12 AC133561.1-201ENST00000568600 2415 ntBASIC20.46■□□□□ 0.87
ATPAF1Q5TC12 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.46■□□□□ 0.87
ATPAF1Q5TC12 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF1Q5TC12 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF1Q5TC12 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF1Q5TC12 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
ATPAF1Q5TC12 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.45■□□□□ 0.86
ATPAF1Q5TC12 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ATPAF1Q5TC12 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.45■□□□□ 0.86
ATPAF1Q5TC12 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms