Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
PDS5AQ29RF7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
PDS5AQ29RF7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.98■■■□□ 2.23
PDS5AQ29RF7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PDS5AQ29RF7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
PDS5AQ29RF7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
PDS5AQ29RF7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
PDS5AQ29RF7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
PDS5AQ29RF7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
PDS5AQ29RF7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
PDS5AQ29RF7 KRT18P24-201ENST00000344739 1156 ntBASIC28.96■■■□□ 2.23
PDS5AQ29RF7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
PDS5AQ29RF7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
PDS5AQ29RF7 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.96■■■□□ 2.23
PDS5AQ29RF7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
PDS5AQ29RF7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.95■■■□□ 2.23
PDS5AQ29RF7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PDS5AQ29RF7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.95■■■□□ 2.22
PDS5AQ29RF7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PDS5AQ29RF7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.94■■■□□ 2.22
PDS5AQ29RF7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
PDS5AQ29RF7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PDS5AQ29RF7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.94■■■□□ 2.22
PDS5AQ29RF7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.94■■■□□ 2.22
PDS5AQ29RF7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
PDS5AQ29RF7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
PDS5AQ29RF7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PDS5AQ29RF7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
PDS5AQ29RF7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
PDS5AQ29RF7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
PDS5AQ29RF7 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.93■■■□□ 2.22
PDS5AQ29RF7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PDS5AQ29RF7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PDS5AQ29RF7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PDS5AQ29RF7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PDS5AQ29RF7 AL592295.1-201ENST00000400984 884 ntBASIC28.92■■■□□ 2.22
PDS5AQ29RF7 Z92544.1-202ENST00000571933 1220 ntBASIC28.92■■■□□ 2.22
PDS5AQ29RF7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PDS5AQ29RF7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PDS5AQ29RF7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.91■■■□□ 2.22
PDS5AQ29RF7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.91■■■□□ 2.22
PDS5AQ29RF7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.91■■■□□ 2.22
PDS5AQ29RF7 GUSBP5-201ENST00000418136 578 ntBASIC28.91■■■□□ 2.22
PDS5AQ29RF7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.91■■■□□ 2.22
PDS5AQ29RF7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PDS5AQ29RF7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
PDS5AQ29RF7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.9■■■□□ 2.22
PDS5AQ29RF7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
PDS5AQ29RF7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PDS5AQ29RF7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PDS5AQ29RF7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
PDS5AQ29RF7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.89■■■□□ 2.22
PDS5AQ29RF7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
PDS5AQ29RF7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
PDS5AQ29RF7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.89■■■□□ 2.21
PDS5AQ29RF7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.89■■■□□ 2.21
PDS5AQ29RF7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.88■■■□□ 2.21
PDS5AQ29RF7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PDS5AQ29RF7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.88■■■□□ 2.21
PDS5AQ29RF7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.88■■■□□ 2.21
PDS5AQ29RF7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
PDS5AQ29RF7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PDS5AQ29RF7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
PDS5AQ29RF7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.87■■■□□ 2.21
PDS5AQ29RF7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.87■■■□□ 2.21
PDS5AQ29RF7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PDS5AQ29RF7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PDS5AQ29RF7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.87■■■□□ 2.21
PDS5AQ29RF7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
PDS5AQ29RF7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDS5AQ29RF7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDS5AQ29RF7 THA1P-201ENST00000590384 1145 ntBASIC28.86■■■□□ 2.21
PDS5AQ29RF7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDS5AQ29RF7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PDS5AQ29RF7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PDS5AQ29RF7 AC120024.1-201ENST00000562672 995 ntBASIC28.85■■■□□ 2.21
PDS5AQ29RF7 AL121749.1-202ENST00000609313 2153 ntBASIC28.85■■■□□ 2.21
PDS5AQ29RF7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDS5AQ29RF7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
PDS5AQ29RF7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.83■■■□□ 2.21
PDS5AQ29RF7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDS5AQ29RF7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDS5AQ29RF7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDS5AQ29RF7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.83■■■□□ 2.21
PDS5AQ29RF7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDS5AQ29RF7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PDS5AQ29RF7 AC011551.1-201ENST00000614101 683 ntBASIC28.83■■■□□ 2.21
PDS5AQ29RF7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDS5AQ29RF7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PDS5AQ29RF7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.82■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms