Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC32.48■■■□□ 2.79
ZC3H6P61129 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
ZC3H6P61129 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC32.48■■■□□ 2.79
ZC3H6P61129 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC32.48■■■□□ 2.79
ZC3H6P61129 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
ZC3H6P61129 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
ZC3H6P61129 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
ZC3H6P61129 MIR4281-201ENST00000580852 62 ntBASIC32.47■■■□□ 2.79
ZC3H6P61129 AC110285.6-201ENST00000617652 491 ntBASIC32.47■■■□□ 2.79
ZC3H6P61129 AL117332.1-201ENST00000622628 974 ntBASIC32.47■■■□□ 2.79
ZC3H6P61129 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
ZC3H6P61129 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.46■■■□□ 2.79
ZC3H6P61129 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
ZC3H6P61129 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC32.46■■■□□ 2.79
ZC3H6P61129 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.46■■■□□ 2.79
ZC3H6P61129 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
ZC3H6P61129 BX255925.1-201ENST00000566954 1854 ntBASIC32.45■■■□□ 2.79
ZC3H6P61129 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
ZC3H6P61129 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
ZC3H6P61129 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
ZC3H6P61129 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
ZC3H6P61129 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ZC3H6P61129 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ZC3H6P61129 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
ZC3H6P61129 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC32.43■■■□□ 2.78
ZC3H6P61129 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
ZC3H6P61129 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
ZC3H6P61129 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.43■■■□□ 2.78
ZC3H6P61129 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.42■■■□□ 2.78
ZC3H6P61129 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
ZC3H6P61129 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC32.42■■■□□ 2.78
ZC3H6P61129 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.42■■■□□ 2.78
ZC3H6P61129 AC010997.5-201ENST00000609182 354 ntBASIC32.42■■■□□ 2.78
ZC3H6P61129 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
ZC3H6P61129 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
ZC3H6P61129 MIR3621-201ENST00000580529 85 ntBASIC32.41■■■□□ 2.78
ZC3H6P61129 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.41■■■□□ 2.78
ZC3H6P61129 DRD5P2-201ENST00000421395 2012 ntBASIC32.4■■■□□ 2.78
ZC3H6P61129 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ZC3H6P61129 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ZC3H6P61129 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
ZC3H6P61129 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC32.39■■■□□ 2.78
ZC3H6P61129 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
ZC3H6P61129 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.39■■■□□ 2.78
ZC3H6P61129 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
ZC3H6P61129 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.39■■■□□ 2.78
ZC3H6P61129 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
ZC3H6P61129 LSM4-201ENST00000252816 986 ntTSL 2 BASIC32.37■■■□□ 2.77
ZC3H6P61129 AC096631.2-201ENST00000436136 790 ntBASIC32.37■■■□□ 2.77
ZC3H6P61129 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ZC3H6P61129 MIR4466-201ENST00000606121 54 ntBASIC32.37■■■□□ 2.77
ZC3H6P61129 AC005837.3-201ENST00000612163 286 ntBASIC32.37■■■□□ 2.77
ZC3H6P61129 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ZC3H6P61129 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.36■■■□□ 2.77
ZC3H6P61129 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC32.36■■■□□ 2.77
ZC3H6P61129 MIR6724-1-201ENST00000616420 92 ntBASIC32.36■■■□□ 2.77
ZC3H6P61129 MIR6724-2-201ENST00000616483 92 ntBASIC32.36■■■□□ 2.77
ZC3H6P61129 MIR6724-4-201ENST00000617390 92 ntBASIC32.36■■■□□ 2.77
ZC3H6P61129 MIR6724-3-201ENST00000622482 92 ntBASIC32.36■■■□□ 2.77
ZC3H6P61129 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
ZC3H6P61129 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
ZC3H6P61129 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
ZC3H6P61129 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ZC3H6P61129 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ZC3H6P61129 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ZC3H6P61129 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.35■■■□□ 2.77
ZC3H6P61129 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.35■■■□□ 2.77
ZC3H6P61129 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
ZC3H6P61129 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
ZC3H6P61129 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
ZC3H6P61129 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ZC3H6P61129 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ZC3H6P61129 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
ZC3H6P61129 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
ZC3H6P61129 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
ZC3H6P61129 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.34■■■□□ 2.77
ZC3H6P61129 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.34■■■□□ 2.77
ZC3H6P61129 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
ZC3H6P61129 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.33■■■□□ 2.77
ZC3H6P61129 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
ZC3H6P61129 LINC01003-201ENST00000564834 1764 ntBASIC32.32■■■□□ 2.77
ZC3H6P61129 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
ZC3H6P61129 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.32■■■□□ 2.76
ZC3H6P61129 MTDHP2-201ENST00000601468 714 ntBASIC32.32■■■□□ 2.76
ZC3H6P61129 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
ZC3H6P61129 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.32■■■□□ 2.76
ZC3H6P61129 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
ZC3H6P61129 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC32.32■■■□□ 2.76
ZC3H6P61129 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC32.31■■■□□ 2.76
ZC3H6P61129 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.31■■■□□ 2.76
ZC3H6P61129 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC32.3■■■□□ 2.76
ZC3H6P61129 AC139426.1-201ENST00000568218 2529 ntBASIC32.3■■■□□ 2.76
ZC3H6P61129 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
ZC3H6P61129 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ZC3H6P61129 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
ZC3H6P61129 AL356740.2-201ENST00000601559 647 ntBASIC32.29■■■□□ 2.76
ZC3H6P61129 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
ZC3H6P61129 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.29■■■□□ 2.76
ZC3H6P61129 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ZC3H6P61129 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms