Protein–RNA interactions for Protein: P48426

PIP4K2A, Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIP4K2AP48426 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
PIP4K2AP48426 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
PIP4K2AP48426 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.7■■■□□ 2.51
PIP4K2AP48426 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.7■■■□□ 2.51
PIP4K2AP48426 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PIP4K2AP48426 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PIP4K2AP48426 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PIP4K2AP48426 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.69■■■□□ 2.5
PIP4K2AP48426 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PIP4K2AP48426 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.69■■■□□ 2.5
PIP4K2AP48426 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.69■■■□□ 2.5
PIP4K2AP48426 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PIP4K2AP48426 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PIP4K2AP48426 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.68■■■□□ 2.5
PIP4K2AP48426 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PIP4K2AP48426 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.68■■■□□ 2.5
PIP4K2AP48426 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PIP4K2AP48426 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PIP4K2AP48426 Z92544.1-202ENST00000571933 1220 ntBASIC30.67■■■□□ 2.5
PIP4K2AP48426 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PIP4K2AP48426 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PIP4K2AP48426 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.66■■■□□ 2.5
PIP4K2AP48426 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
PIP4K2AP48426 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
PIP4K2AP48426 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
PIP4K2AP48426 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PIP4K2AP48426 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.65■■■□□ 2.5
PIP4K2AP48426 AC120024.1-201ENST00000562672 995 ntBASIC30.65■■■□□ 2.5
PIP4K2AP48426 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.65■■■□□ 2.5
PIP4K2AP48426 MIR4787-201ENST00000607364 84 ntBASIC30.65■■■□□ 2.5
PIP4K2AP48426 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PIP4K2AP48426 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PIP4K2AP48426 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
PIP4K2AP48426 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
PIP4K2AP48426 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
PIP4K2AP48426 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.64■■■□□ 2.5
PIP4K2AP48426 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.64■■■□□ 2.5
PIP4K2AP48426 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PIP4K2AP48426 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PIP4K2AP48426 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PIP4K2AP48426 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.63■■■□□ 2.49
PIP4K2AP48426 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PIP4K2AP48426 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PIP4K2AP48426 UNC93B8-201ENST00000511903 705 ntBASIC30.63■■■□□ 2.49
PIP4K2AP48426 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.63■■■□□ 2.49
PIP4K2AP48426 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PIP4K2AP48426 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.63■■■□□ 2.49
PIP4K2AP48426 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PIP4K2AP48426 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PIP4K2AP48426 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.62■■■□□ 2.49
PIP4K2AP48426 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
PIP4K2AP48426 KRT18P24-201ENST00000344739 1156 ntBASIC30.62■■■□□ 2.49
PIP4K2AP48426 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PIP4K2AP48426 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
PIP4K2AP48426 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.61■■■□□ 2.49
PIP4K2AP48426 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.61■■■□□ 2.49
PIP4K2AP48426 KRT18P10-201ENST00000388836 1287 ntBASIC30.61■■■□□ 2.49
PIP4K2AP48426 AC022616.5-201ENST00000518796 181 ntBASIC30.61■■■□□ 2.49
PIP4K2AP48426 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.61■■■□□ 2.49
PIP4K2AP48426 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.61■■■□□ 2.49
PIP4K2AP48426 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
PIP4K2AP48426 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PIP4K2AP48426 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
PIP4K2AP48426 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
PIP4K2AP48426 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PIP4K2AP48426 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
PIP4K2AP48426 BX664725.1-201ENST00000438252 379 ntBASIC30.59■■■□□ 2.49
PIP4K2AP48426 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.59■■■□□ 2.49
PIP4K2AP48426 KRT125P-201ENST00000546827 989 ntBASIC30.59■■■□□ 2.49
PIP4K2AP48426 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
PIP4K2AP48426 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.58■■■□□ 2.49
PIP4K2AP48426 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PIP4K2AP48426 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PIP4K2AP48426 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
PIP4K2AP48426 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
PIP4K2AP48426 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.57■■■□□ 2.48
PIP4K2AP48426 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PIP4K2AP48426 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PIP4K2AP48426 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.56■■■□□ 2.48
PIP4K2AP48426 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
PIP4K2AP48426 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
PIP4K2AP48426 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
PIP4K2AP48426 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PIP4K2AP48426 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
PIP4K2AP48426 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.55■■■□□ 2.48
PIP4K2AP48426 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PIP4K2AP48426 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.55■■■□□ 2.48
PIP4K2AP48426 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.55■■■□□ 2.48
PIP4K2AP48426 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PIP4K2AP48426 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PIP4K2AP48426 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PIP4K2AP48426 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PIP4K2AP48426 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PIP4K2AP48426 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.53■■■□□ 2.48
PIP4K2AP48426 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.53■■■□□ 2.48
PIP4K2AP48426 TSPY9P-201ENST00000440215 945 ntBASIC30.53■■■□□ 2.48
PIP4K2AP48426 TSPY11P-201ENST00000442607 1045 ntBASIC30.53■■■□□ 2.48
PIP4K2AP48426 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.53■■■□□ 2.48
PIP4K2AP48426 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
PIP4K2AP48426 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms