Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 NPA3YJR072C 1158 nt7.33□□□□□ -1.24
RTR1P40084 AMD1YML035C 2433 nt7.33□□□□□ -1.24
RTR1P40084 GLE1YDL207W 1617 nt7.32□□□□□ -1.24
RTR1P40084 APS3YJL024C 585 nt7.32□□□□□ -1.24
RTR1P40084 CCP1YKR066C 1086 nt7.32□□□□□ -1.24
RTR1P40084 TAL1YLR354C 1008 nt7.32□□□□□ -1.24
RTR1P40084 YML6YML025C 861 nt7.32□□□□□ -1.24
RTR1P40084 VPS4YPR173C 1314 nt7.31□□□□□ -1.24
RTR1P40084 MDH3YDL078C 1032 nt7.31□□□□□ -1.24
RTR1P40084 YER148W-AYER148W-A 579 nt7.31□□□□□ -1.24
RTR1P40084 STM1YLR150W 822 nt7.31□□□□□ -1.24
RTR1P40084 AVT4YNL101W 2142 nt7.3□□□□□ -1.24
RTR1P40084 SSP120YLR250W 705 nt7.3□□□□□ -1.24
RTR1P40084 RPN7YPR108W 1290 nt7.3□□□□□ -1.24
RTR1P40084 MTF2YDL044C 1323 nt7.29□□□□□ -1.24
RTR1P40084 HSP78YDR258C 2436 nt7.29□□□□□ -1.24
RTR1P40084 YCR047W-AYCR047W-A 207 nt7.29□□□□□ -1.24
RTR1P40084 YER186CYER186C 921 nt7.29□□□□□ -1.24
RTR1P40084 YRA1YDR381W 681 nt7.28□□□□□ -1.24
RTR1P40084 PPM1YDR435C 987 nt7.28□□□□□ -1.24
RTR1P40084 YEA6YEL006W 1008 nt7.28□□□□□ -1.24
RTR1P40084 YDR514CYDR514C 1452 nt7.28□□□□□ -1.24
RTR1P40084 PYC1YGL062W 3537 nt7.27□□□□□ -1.25
RTR1P40084 YCL065WYCL065W 369 nt7.27□□□□□ -1.25
RTR1P40084 YDL172CYDL172C 480 nt7.27□□□□□ -1.25
RTR1P40084 KSS1YGR040W 1107 nt7.27□□□□□ -1.25
RTR1P40084 ECM30YLR436C 3825 nt7.27□□□□□ -1.25
RTR1P40084 CSL4YNL232W 879 nt7.27□□□□□ -1.25
RTR1P40084 SCO2YBR024W 906 nt7.27□□□□□ -1.25
RTR1P40084 STB5YHR178W 2232 nt7.27□□□□□ -1.25
RTR1P40084 ORC5YNL261W 1440 nt7.27□□□□□ -1.25
RTR1P40084 ERG12YMR208W 1332 nt7.27□□□□□ -1.25
RTR1P40084 ERP5YHR110W 639 nt7.26□□□□□ -1.25
RTR1P40084 PAN6YIL145C 930 nt7.26□□□□□ -1.25
RTR1P40084 RPL10YLR075W 666 nt7.26□□□□□ -1.25
RTR1P40084 YNL200CYNL200C 741 nt7.26□□□□□ -1.25
RTR1P40084 CSG2YBR036C 1233 nt7.26□□□□□ -1.25
RTR1P40084 PRP46YPL151C 1356 nt7.25□□□□□ -1.25
RTR1P40084 YDL119CYDL119C 924 nt7.25□□□□□ -1.25
RTR1P40084 YER010CYER010C 705 nt7.25□□□□□ -1.25
RTR1P40084 MRPL22YNL177C 930 nt7.24□□□□□ -1.25
RTR1P40084 YBR124WYBR124W 360 nt7.24□□□□□ -1.25
RTR1P40084 CCR4YAL021C 2514 nt7.23□□□□□ -1.25
RTR1P40084 QCR6YFR033C 444 nt7.23□□□□□ -1.25
RTR1P40084 LST8YNL006W 912 nt7.23□□□□□ -1.25
RTR1P40084 SHM1YBR263W 1473 nt7.23□□□□□ -1.25
RTR1P40084 HIS7YBR248C 1659 nt7.22□□□□□ -1.25
RTR1P40084 RAP1YNL216W 2484 nt7.22□□□□□ -1.25
RTR1P40084 YME1YPR024W 2244 nt7.22□□□□□ -1.25
RTR1P40084 BIM1YER016W 1035 nt7.22□□□□□ -1.25
RTR1P40084 MRP17YKL003C 396 nt7.22□□□□□ -1.25
RTR1P40084 YNR075C-AYNR075C-A 93 nt7.22□□□□□ -1.25
RTR1P40084 VPS5YOR069W 2028 nt7.22□□□□□ -1.25
RTR1P40084 CDC19YAL038W 1503 nt7.22□□□□□ -1.25
RTR1P40084 YRF1-4YLR466W 4149 nt7.21□□□□□ -1.26
RTR1P40084 VNX1YNL321W 2727 nt7.21□□□□□ -1.26
RTR1P40084 YKL031WYKL031W 414 nt7.21□□□□□ -1.26
RTR1P40084 MLC2YPR188C 492 nt7.21□□□□□ -1.26
RTR1P40084 ACO1YLR304C 2337 nt7.21□□□□□ -1.26
RTR1P40084 VTS1YOR359W 1572 nt7.2□□□□□ -1.26
RTR1P40084 YDR154CYDR154C 351 nt7.2□□□□□ -1.26
RTR1P40084 YGR022CYGR022C 330 nt7.2□□□□□ -1.26
RTR1P40084 CBP4YGR174C 513 nt7.2□□□□□ -1.26
RTR1P40084 ARR3YPR201W 1215 nt7.2□□□□□ -1.26
RTR1P40084 YEH1YLL012W 1722 nt7.2□□□□□ -1.26
RTR1P40084 CBK1YNL161W 2271 nt7.2□□□□□ -1.26
RTR1P40084 RIO1YOR119C 1455 nt7.19□□□□□ -1.26
RTR1P40084 HIR1YBL008W 2523 nt7.19□□□□□ -1.26
RTR1P40084 CEF1YMR213W 1773 nt7.19□□□□□ -1.26
RTR1P40084 DON1YDR273W 1098 nt7.19□□□□□ -1.26
RTR1P40084 RPR2YIR015W 435 nt7.19□□□□□ -1.26
RTR1P40084 RPL7AYGL076C 735 nt7.18□□□□□ -1.26
RTR1P40084 MGM101YJR144W 810 nt7.18□□□□□ -1.26
RTR1P40084 MTC2YKL098W 1074 nt7.18□□□□□ -1.26
RTR1P40084 RPL7BYPL198W 735 nt7.18□□□□□ -1.26
RTR1P40084 QNS1YHR074W 2145 nt7.17□□□□□ -1.26
RTR1P40084 DPH5YLR172C 903 nt7.17□□□□□ -1.26
RTR1P40084 YDL057WYDL057W 987 nt7.16□□□□□ -1.26
RTR1P40084 DCN1YLR128W 810 nt7.16□□□□□ -1.26
RTR1P40084 IME2YJL106W 1938 nt7.16□□□□□ -1.26
RTR1P40084 UBP13YBL067C 2244 nt7.15□□□□□ -1.26
RTR1P40084 PAT1YCR077C 2391 nt7.15□□□□□ -1.26
RTR1P40084 GFD1YMR255W 567 nt7.15□□□□□ -1.26
RTR1P40084 SMF2YHR050W 1650 nt7.15□□□□□ -1.27
RTR1P40084 GUA1YMR217W 1578 nt7.14□□□□□ -1.27
RTR1P40084 MID1YNL291C 1647 nt7.13□□□□□ -1.27
RTR1P40084 ATP1YBL099W 1638 nt7.13□□□□□ -1.27
RTR1P40084 OAC1YKL120W 975 nt7.13□□□□□ -1.27
RTR1P40084 QDR3YBR043C 2070 nt7.13□□□□□ -1.27
RTR1P40084 BUL1YMR275C 2931 nt7.12□□□□□ -1.27
RTR1P40084 SNZ3YFL059W 897 nt7.12□□□□□ -1.27
RTR1P40084 SNZ2YNL333W 897 nt7.12□□□□□ -1.27
RTR1P40084 RBD2YPL246C 789 nt7.12□□□□□ -1.27
RTR1P40084 MRPL36YBR122C 534 nt7.12□□□□□ -1.27
RTR1P40084 HCR1YLR192C 798 nt7.11□□□□□ -1.27
RTR1P40084 MRC1YCL061C 3291 nt7.11□□□□□ -1.27
RTR1P40084 CLB1YGR108W 1416 nt7.1□□□□□ -1.27
RTR1P40084 ADY2YCR010C 852 nt7.1□□□□□ -1.27
RTR1P40084 snR82snR82 268 nt7.1□□□□□ -1.27
RTR1P40084 EFM4YIL064W 774 nt7.1□□□□□ -1.27
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms