Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.39■■■□□ 2.143e-17■■■■□ 25
CSTF2P33240 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.09■■■□□ 2.093e-17■■■■□ 25
CSTF2P33240 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.97■□□□□ 0.793e-17■■■■□ 25
CSTF2P33240 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.257e-7■■■■□ 24.9
CSTF2P33240 NOL4L-208ENST00000475781 1127 ntTSL 516.15■□□□□ 0.187e-7■■■■□ 24.9
CSTF2P33240 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.49■□□□□ 0.077e-7■■■■□ 24.9
CSTF2P33240 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.92□□□□□ -0.57e-7■■■■□ 24.9
CSTF2P33240 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.28■□□□□ 0.363e-6■■■■□ 24.9
CSTF2P33240 RBCK1-210ENST00000441733 961 ntTSL 517.12■□□□□ 0.333e-6■■■■□ 24.9
CSTF2P33240 RBCK1-209ENST00000415942 2613 ntTSL 516.61■□□□□ 0.253e-6■■■■□ 24.9
CSTF2P33240 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.51■□□□□ 0.233e-6■■■■□ 24.9
CSTF2P33240 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.223e-6■■■■□ 24.9
CSTF2P33240 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.18■□□□□ 0.023e-6■■■■□ 24.9
CSTF2P33240 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)14.69□□□□□ -0.063e-6■■■■□ 24.9
CSTF2P33240 RBCK1-208ENST00000414880 765 ntTSL 313.85□□□□□ -0.193e-6■■■■□ 24.9
CSTF2P33240 RBCK1-207ENST00000411647 593 ntTSL 39.71□□□□□ -0.863e-6■■■■□ 24.9
CSTF2P33240 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.998e-8■■■■□ 24.9
CSTF2P33240 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.02■□□□□ 0.487e-9■■■■□ 24.9
CSTF2P33240 EVA1A-211ENST00000490746 589 ntTSL 517.24■□□□□ 0.357e-9■■■■□ 24.9
CSTF2P33240 EVA1A-208ENST00000485891 479 ntTSL 516.31■□□□□ 0.27e-9■■■■□ 24.9
CSTF2P33240 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.02□□□□□ -0.177e-9■■■■□ 24.9
CSTF2P33240 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC12.01□□□□□ -0.497e-9■■■■□ 24.9
CSTF2P33240 AC069277.1-203ENST00000414603 517 ntTSL 39.27□□□□□ -0.937e-9■■■■□ 24.9
CSTF2P33240 PLCB1-214ENST00000626161 706 ntTSL 515.73■□□□□ 0.116e-7■■■■□ 24.8
CSTF2P33240 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.576e-9■■■■□ 24.8
CSTF2P33240 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.026e-9■■■■□ 24.8
CSTF2P33240 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.618e-7■■■■□ 24.8
CSTF2P33240 TJP2-205ENST00000423935 614 ntTSL 218.41■□□□□ 0.548e-7■■■■□ 24.8
CSTF2P33240 TJP2-210ENST00000606364 591 ntTSL 412.14□□□□□ -0.478e-7■■■■□ 24.8
CSTF2P33240 TJP2-203ENST00000377259 588 ntTSL 39.59□□□□□ -0.878e-7■■■■□ 24.8
CSTF2P33240 BACH1-203ENST00000422809 850 ntTSL 54.77□□□□□ -1.653e-8■■■■□ 24.7
CSTF2P33240 BACH1-208ENST00000468059 663 ntTSL 34.77□□□□□ -1.653e-8■■■■□ 24.7
CSTF2P33240 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.37■□□□□ 0.536e-7■■■■□ 24.7
CSTF2P33240 MRPS6-202ENST00000477091 1061 ntTSL 517.22■□□□□ 0.351e-6■■■■□ 24.7
CSTF2P33240 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.091e-6■■■■□ 24.7
CSTF2P33240 MRPS6-205ENST00000488492 909 ntTSL 55.97□□□□□ -1.451e-6■■■■□ 24.7
CSTF2P33240 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.861e-6■■■■□ 24.7
CSTF2P33240 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.05■□□□□ 0.321e-6■■■■□ 24.7
CSTF2P33240 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.241e-6■■■■□ 24.7
CSTF2P33240 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.16■□□□□ 0.181e-6■■■■□ 24.7
CSTF2P33240 KDM4B-210ENST00000592175 562 ntTSL 416.06■□□□□ 0.161e-6■■■■□ 24.7
CSTF2P33240 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.81■□□□□ 0.121e-6■■■■□ 24.7
CSTF2P33240 KDM4B-208ENST00000589104 3470 ntTSL 212.78□□□□□ -0.361e-6■■■■□ 24.7
CSTF2P33240 GMDS-207ENST00000530459 520 ntTSL 34.93□□□□□ -1.623e-7■■■■□ 24.7
CSTF2P33240 F7-205ENST00000479674 767 ntTSL 522.86■■□□□ 1.257e-9■■■■□ 24.7
CSTF2P33240 ACSS2-216ENST00000484354 517 ntTSL 522.49■■□□□ 1.197e-9■■■■□ 24.7
CSTF2P33240 ACSS2-205ENST00000467019 504 ntTSL 421.25■□□□□ 0.997e-9■■■■□ 24.7
CSTF2P33240 ACSS2-213ENST00000480978 844 ntTSL 220.66■□□□□ 0.97e-9■■■■□ 24.7
CSTF2P33240 F7-203ENST00000444337 564 ntTSL 519.6■□□□□ 0.737e-9■■■■□ 24.7
CSTF2P33240 ACSS2-222ENST00000493805 603 ntTSL 419.45■□□□□ 0.77e-9■■■■□ 24.7
CSTF2P33240 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.697e-9■■■■□ 24.7
CSTF2P33240 ACSS2-208ENST00000473172 665 ntTSL 319.34■□□□□ 0.697e-9■■■■□ 24.7
CSTF2P33240 ACSS2-211ENST00000477932 2450 ntTSL 519.22■□□□□ 0.677e-9■■■■□ 24.7
CSTF2P33240 ZNF331-212ENST00000509069 461 ntTSL 318.86■□□□□ 0.617e-9■■■■□ 24.7
CSTF2P33240 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.67e-9■■■■□ 24.7
CSTF2P33240 ACSS2-210ENST00000476922 1527 ntTSL 218.09■□□□□ 0.497e-9■■■■□ 24.7
CSTF2P33240 F7-204ENST00000473085 558 ntTSL 417.93■□□□□ 0.467e-9■■■■□ 24.7
CSTF2P33240 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.59■□□□□ 0.257e-9■■■■□ 24.7
CSTF2P33240 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.48■□□□□ 0.077e-9■■■■□ 24.7
CSTF2P33240 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.067e-9■■■■□ 24.7
CSTF2P33240 PPP6R3-217ENST00000529344 603 ntTSL 415.41■□□□□ 0.063e-6■■■■□ 24.7
CSTF2P33240 PPP6R3-215ENST00000528635 538 ntTSL 415.41■□□□□ 0.063e-6■■■■□ 24.7
CSTF2P33240 ZNF331-206ENST00000504033 578 ntTSL 515.31■□□□□ 0.047e-9■■■■□ 24.7
CSTF2P33240 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.017e-9■■■■□ 24.7
CSTF2P33240 ZNF331-211ENST00000509047 670 ntTSL 314.09□□□□□ -0.157e-9■■■■□ 24.7
CSTF2P33240 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.237e-9■■■■□ 24.7
CSTF2P33240 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.237e-9■■■■□ 24.7
CSTF2P33240 ACSS2-215ENST00000481971 570 ntTSL 413.58□□□□□ -0.247e-9■■■■□ 24.7
CSTF2P33240 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.287e-9■■■■□ 24.7
CSTF2P33240 ACSS2-212ENST00000480274 567 ntTSL 513.08□□□□□ -0.327e-9■■■■□ 24.7
CSTF2P33240 ACSS2-209ENST00000475459 558 ntTSL 412.66□□□□□ -0.387e-9■■■■□ 24.7
CSTF2P33240 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.467e-9■■■■□ 24.7
CSTF2P33240 ZNF331-213ENST00000509585 562 ntTSL 511.69□□□□□ -0.547e-9■■■■□ 24.7
CSTF2P33240 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC11.29□□□□□ -0.63e-6■■■■□ 24.7
CSTF2P33240 F7-206ENST00000541084 2873 ntTSL 2 BASIC11.12□□□□□ -0.637e-9■■■■□ 24.7
CSTF2P33240 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.647e-9■■■■□ 24.7
CSTF2P33240 PPP6R3-220ENST00000530427 560 ntTSL 511.03□□□□□ -0.643e-6■■■■□ 24.7
CSTF2P33240 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.687e-9■■■■□ 24.7
CSTF2P33240 WEE1-201ENST00000299613 3436 ntTSL 2 BASIC10.78□□□□□ -0.687e-9■■■■□ 24.7
CSTF2P33240 ZNF331-204ENST00000502248 670 ntTSL 1 (best)10.74□□□□□ -0.697e-9■■■■□ 24.7
CSTF2P33240 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.713e-6■■■■□ 24.7
CSTF2P33240 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC10.46□□□□□ -0.743e-6■■■■□ 24.7
CSTF2P33240 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC10.26□□□□□ -0.773e-6■■■■□ 24.7
CSTF2P33240 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC10.1□□□□□ -0.793e-6■■■■□ 24.7
CSTF2P33240 ACSS2-217ENST00000488172 648 ntTSL 410.04□□□□□ -0.87e-9■■■■□ 24.7
CSTF2P33240 ACSS2-224ENST00000497927 580 ntTSL 410.04□□□□□ -0.87e-9■■■■□ 24.7
CSTF2P33240 SRRM2-216ENST00000573583 543 ntTSL 49.88□□□□□ -0.837e-9■■■■□ 24.7
CSTF2P33240 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC9.81□□□□□ -0.843e-6■■■■□ 24.7
CSTF2P33240 PPP6R3-219ENST00000529907 826 ntTSL 59.59□□□□□ -0.873e-6■■■■□ 24.7
CSTF2P33240 PPP6R3-224ENST00000533127 551 ntTSL 49.59□□□□□ -0.873e-6■■■■□ 24.7
CSTF2P33240 ACSS2-214ENST00000481284 2851 ntTSL 29.18□□□□□ -0.947e-9■■■■□ 24.7
CSTF2P33240 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.11□□□□□ -1.113e-6■■■■□ 24.7
CSTF2P33240 ZNF331-222ENST00000514374 574 ntTSL 48.02□□□□□ -1.137e-9■■■■□ 24.7
CSTF2P33240 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.23e-6■■■■□ 24.7
CSTF2P33240 WEE1-203ENST00000524549 5187 ntTSL 27.26□□□□□ -1.257e-9■■■■□ 24.7
CSTF2P33240 ACSS2-204ENST00000464399 358 ntTSL 56.43□□□□□ -1.387e-9■■■■□ 24.7
CSTF2P33240 WEE1-204ENST00000524612 573 ntTSL 43.81□□□□□ -1.87e-9■■■■□ 24.7
CSTF2P33240 snoU13.6-201ENST00000458785 104 ntBASIC2.13□□□□□ -2.077e-9■■■■□ 24.7
CSTF2P33240 FRG1HP-202ENST00000611606 945 ntTSL 1 (best)17.31■□□□□ 0.363e-7■■■■□ 24.6
CSTF2P33240 FRG1HP-204ENST00000617940 757 ntBASIC4.35□□□□□ -1.713e-7■■■■□ 24.6
Retrieved 100 of 6,735 protein–RNA pairs in 33.1 ms