Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL035685.1-201ENST00000636663 812 ntBASIC20.21■□□□□ 0.83
COL8A2P25067 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL8A2P25067 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL8A2P25067 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COL8A2P25067 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL8A2P25067 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL8A2P25067 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
COL8A2P25067 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL8A2P25067 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL8A2P25067 AC103724.3-201ENST00000564481 992 ntBASIC20.2■□□□□ 0.82
COL8A2P25067 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.2■□□□□ 0.82
COL8A2P25067 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.2■□□□□ 0.82
COL8A2P25067 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL8A2P25067 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COL8A2P25067 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL8A2P25067 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL8A2P25067 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL8A2P25067 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
COL8A2P25067 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL8A2P25067 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL8A2P25067 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.19■□□□□ 0.82
COL8A2P25067 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.19■□□□□ 0.82
COL8A2P25067 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.19■□□□□ 0.82
COL8A2P25067 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.19■□□□□ 0.82
COL8A2P25067 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COL8A2P25067 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL8A2P25067 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL8A2P25067 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL8A2P25067 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.18■□□□□ 0.82
COL8A2P25067 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
COL8A2P25067 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL8A2P25067 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COL8A2P25067 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
COL8A2P25067 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL8A2P25067 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL8A2P25067 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COL8A2P25067 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL8A2P25067 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL8A2P25067 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.17■□□□□ 0.82
COL8A2P25067 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL8A2P25067 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.17■□□□□ 0.82
COL8A2P25067 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL8A2P25067 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL8A2P25067 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL8A2P25067 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL8A2P25067 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.16■□□□□ 0.82
COL8A2P25067 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.16■□□□□ 0.82
COL8A2P25067 AC009299.2-201ENST00000482477 511 ntBASIC20.16■□□□□ 0.82
COL8A2P25067 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.16■□□□□ 0.82
COL8A2P25067 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL8A2P25067 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.16■□□□□ 0.82
COL8A2P25067 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.16■□□□□ 0.82
COL8A2P25067 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL8A2P25067 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL8A2P25067 AL031848.2-201ENST00000607670 837 ntBASIC20.15■□□□□ 0.82
COL8A2P25067 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL8A2P25067 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL8A2P25067 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL8A2P25067 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
COL8A2P25067 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL8A2P25067 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL8A2P25067 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.14■□□□□ 0.81
COL8A2P25067 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL8A2P25067 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL8A2P25067 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL8A2P25067 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL8A2P25067 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL8A2P25067 AC135731.1-201ENST00000569415 2548 ntBASIC20.13■□□□□ 0.81
COL8A2P25067 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.13■□□□□ 0.81
COL8A2P25067 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL8A2P25067 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL8A2P25067 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL8A2P25067 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.12■□□□□ 0.81
COL8A2P25067 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.12■□□□□ 0.81
COL8A2P25067 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.12■□□□□ 0.81
COL8A2P25067 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL8A2P25067 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL8A2P25067 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
COL8A2P25067 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL8A2P25067 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL8A2P25067 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.12■□□□□ 0.81
COL8A2P25067 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL8A2P25067 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL8A2P25067 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL8A2P25067 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL8A2P25067 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL8A2P25067 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL8A2P25067 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL8A2P25067 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL8A2P25067 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL8A2P25067 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL8A2P25067 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL8A2P25067 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.1■□□□□ 0.81
COL8A2P25067 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL8A2P25067 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.1■□□□□ 0.81
COL8A2P25067 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL8A2P25067 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL8A2P25067 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL8A2P25067 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL8A2P25067 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms