Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOD3P08294 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD3P08294 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD3P08294 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SOD3P08294 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOD3P08294 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
SOD3P08294 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD3P08294 AC131212.1-201ENST00000613771 668 ntBASIC20.59■□□□□ 0.89
SOD3P08294 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOD3P08294 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SOD3P08294 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOD3P08294 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOD3P08294 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SOD3P08294 AC239859.2-201ENST00000444165 318 ntBASIC20.58■□□□□ 0.89
SOD3P08294 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.58■□□□□ 0.89
SOD3P08294 THA1P-201ENST00000590384 1145 ntBASIC20.58■□□□□ 0.89
SOD3P08294 AC142472.1-201ENST00000612013 1741 ntBASIC20.58■□□□□ 0.88
SOD3P08294 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOD3P08294 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOD3P08294 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SOD3P08294 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOD3P08294 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SOD3P08294 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.57■□□□□ 0.88
SOD3P08294 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOD3P08294 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOD3P08294 KRT18P10-201ENST00000388836 1287 ntBASIC20.57■□□□□ 0.88
SOD3P08294 AL592295.1-201ENST00000400984 884 ntBASIC20.57■□□□□ 0.88
SOD3P08294 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOD3P08294 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD3P08294 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.56■□□□□ 0.88
SOD3P08294 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD3P08294 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD3P08294 AC142086.6-201ENST00000621154 1765 ntBASIC20.56■□□□□ 0.88
SOD3P08294 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD3P08294 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOD3P08294 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.55■□□□□ 0.88
SOD3P08294 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SOD3P08294 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOD3P08294 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.55■□□□□ 0.88
SOD3P08294 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.54■□□□□ 0.88
SOD3P08294 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.54■□□□□ 0.88
SOD3P08294 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.54■□□□□ 0.88
SOD3P08294 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOD3P08294 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOD3P08294 AP004609.3-201ENST00000610705 1884 ntBASIC20.54■□□□□ 0.88
SOD3P08294 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SOD3P08294 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SOD3P08294 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD3P08294 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD3P08294 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.53■□□□□ 0.88
SOD3P08294 AL356441.2-201ENST00000443009 864 ntBASIC20.53■□□□□ 0.88
SOD3P08294 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SOD3P08294 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
SOD3P08294 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD3P08294 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD3P08294 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD3P08294 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD3P08294 Z92544.1-202ENST00000571933 1220 ntBASIC20.52■□□□□ 0.88
SOD3P08294 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.52■□□□□ 0.88
SOD3P08294 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.52■□□□□ 0.88
SOD3P08294 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD3P08294 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOD3P08294 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.51■□□□□ 0.87
SOD3P08294 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SOD3P08294 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SOD3P08294 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.5■□□□□ 0.87
SOD3P08294 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SOD3P08294 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOD3P08294 AC022616.5-201ENST00000518796 181 ntBASIC20.5■□□□□ 0.87
SOD3P08294 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOD3P08294 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.5■□□□□ 0.87
SOD3P08294 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOD3P08294 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOD3P08294 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOD3P08294 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SOD3P08294 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.49■□□□□ 0.87
SOD3P08294 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SOD3P08294 AL121749.1-202ENST00000609313 2153 ntBASIC20.49■□□□□ 0.87
SOD3P08294 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOD3P08294 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.48■□□□□ 0.87
SOD3P08294 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD3P08294 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD3P08294 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD3P08294 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOD3P08294 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SOD3P08294 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.48■□□□□ 0.87
SOD3P08294 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
SOD3P08294 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SOD3P08294 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.47■□□□□ 0.87
SOD3P08294 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.47■□□□□ 0.87
SOD3P08294 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SOD3P08294 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.47■□□□□ 0.87
SOD3P08294 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOD3P08294 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOD3P08294 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOD3P08294 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SOD3P08294 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOD3P08294 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SOD3P08294 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.46■□□□□ 0.87
SOD3P08294 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms