Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MIR3621-201ENST00000580529 85 ntBASIC32.16■■■□□ 2.74
COL5A2P05997 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.16■■■□□ 2.74
COL5A2P05997 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
COL5A2P05997 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.16■■■□□ 2.74
COL5A2P05997 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
COL5A2P05997 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.16■■■□□ 2.74
COL5A2P05997 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
COL5A2P05997 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL5A2P05997 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
COL5A2P05997 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.15■■■□□ 2.74
COL5A2P05997 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
COL5A2P05997 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.15■■■□□ 2.74
COL5A2P05997 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL5A2P05997 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
COL5A2P05997 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC32.14■■■□□ 2.74
COL5A2P05997 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
COL5A2P05997 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
COL5A2P05997 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.13■■■□□ 2.73
COL5A2P05997 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC32.13■■■□□ 2.73
COL5A2P05997 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
COL5A2P05997 MIR4466-201ENST00000606121 54 ntBASIC32.13■■■□□ 2.73
COL5A2P05997 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.12■■■□□ 2.73
COL5A2P05997 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.12■■■□□ 2.73
COL5A2P05997 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.11■■■□□ 2.73
COL5A2P05997 MIR6724-1-201ENST00000616420 92 ntBASIC32.11■■■□□ 2.73
COL5A2P05997 MIR6724-2-201ENST00000616483 92 ntBASIC32.11■■■□□ 2.73
COL5A2P05997 MIR6724-4-201ENST00000617390 92 ntBASIC32.11■■■□□ 2.73
COL5A2P05997 MIR6724-3-201ENST00000622482 92 ntBASIC32.11■■■□□ 2.73
COL5A2P05997 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
COL5A2P05997 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.11■■■□□ 2.73
COL5A2P05997 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.11■■■□□ 2.73
COL5A2P05997 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.11■■■□□ 2.73
COL5A2P05997 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC32.1■■■□□ 2.73
COL5A2P05997 LSM4-201ENST00000252816 986 ntTSL 2 BASIC32.1■■■□□ 2.73
COL5A2P05997 AC010997.5-201ENST00000609182 354 ntBASIC32.1■■■□□ 2.73
COL5A2P05997 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
COL5A2P05997 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
COL5A2P05997 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
COL5A2P05997 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
COL5A2P05997 AL512631.2-201ENST00000604634 923 ntBASIC32.09■■■□□ 2.73
COL5A2P05997 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
COL5A2P05997 MTDHP2-201ENST00000601468 714 ntBASIC32.08■■■□□ 2.73
COL5A2P05997 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.08■■■□□ 2.73
COL5A2P05997 BX255925.1-201ENST00000566954 1854 ntBASIC32.08■■■□□ 2.73
COL5A2P05997 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
COL5A2P05997 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
COL5A2P05997 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
COL5A2P05997 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.07■■■□□ 2.72
COL5A2P05997 QDPR-206ENST00000508623 601 ntTSL 3 BASIC32.07■■■□□ 2.72
COL5A2P05997 AC096631.2-201ENST00000436136 790 ntBASIC32.06■■■□□ 2.72
COL5A2P05997 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
COL5A2P05997 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
COL5A2P05997 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
COL5A2P05997 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
COL5A2P05997 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
COL5A2P05997 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC32.05■■■□□ 2.72
COL5A2P05997 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
COL5A2P05997 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC32.05■■■□□ 2.72
COL5A2P05997 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.05■■■□□ 2.72
COL5A2P05997 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
COL5A2P05997 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
COL5A2P05997 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC32.04■■■□□ 2.72
COL5A2P05997 AC011551.1-201ENST00000614101 683 ntBASIC32.04■■■□□ 2.72
COL5A2P05997 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
COL5A2P05997 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.04■■■□□ 2.72
COL5A2P05997 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
COL5A2P05997 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.03■■■□□ 2.72
COL5A2P05997 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
COL5A2P05997 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.03■■■□□ 2.72
COL5A2P05997 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.03■■■□□ 2.72
COL5A2P05997 DRD5P2-201ENST00000421395 2012 ntBASIC32.02■■■□□ 2.72
COL5A2P05997 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
COL5A2P05997 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
COL5A2P05997 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC32.02■■■□□ 2.72
COL5A2P05997 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
COL5A2P05997 AC005837.3-201ENST00000612163 286 ntBASIC32.01■■■□□ 2.71
COL5A2P05997 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
COL5A2P05997 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
COL5A2P05997 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
COL5A2P05997 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
COL5A2P05997 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
COL5A2P05997 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32■■■□□ 2.71
COL5A2P05997 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC32■■■□□ 2.71
COL5A2P05997 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
COL5A2P05997 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
COL5A2P05997 AC142472.1-201ENST00000612013 1741 ntBASIC31.99■■■□□ 2.71
COL5A2P05997 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
COL5A2P05997 LINC01003-201ENST00000564834 1764 ntBASIC31.98■■■□□ 2.71
COL5A2P05997 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
COL5A2P05997 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.98■■■□□ 2.71
COL5A2P05997 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
COL5A2P05997 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL5A2P05997 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL5A2P05997 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.97■■■□□ 2.71
COL5A2P05997 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL5A2P05997 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
COL5A2P05997 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
COL5A2P05997 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
COL5A2P05997 AC133561.4-201ENST00000566112 224 ntBASIC31.96■■■□□ 2.71
COL5A2P05997 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms