Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFNA1P01562 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
IFNA1P01562 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IFNA1P01562 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
IFNA1P01562 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
IFNA1P01562 DUSP8P5-201ENST00000422884 1815 ntBASIC18.86■□□□□ 0.61
IFNA1P01562 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
IFNA1P01562 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFNA1P01562 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFNA1P01562 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IFNA1P01562 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
IFNA1P01562 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.85■□□□□ 0.61
IFNA1P01562 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 AP002365.1-201ENST00000603448 772 ntBASIC18.84■□□□□ 0.61
IFNA1P01562 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
IFNA1P01562 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 CLDN5-201ENST00000403084 2357 ntBASIC18.84■□□□□ 0.61
IFNA1P01562 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
IFNA1P01562 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IFNA1P01562 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IFNA1P01562 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IFNA1P01562 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
IFNA1P01562 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
IFNA1P01562 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFNA1P01562 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFNA1P01562 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFNA1P01562 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IFNA1P01562 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.83■□□□□ 0.6
IFNA1P01562 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFNA1P01562 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFNA1P01562 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.82■□□□□ 0.6
IFNA1P01562 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFNA1P01562 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.82■□□□□ 0.6
IFNA1P01562 AC096887.2-201ENST00000623443 1957 ntBASIC18.82■□□□□ 0.6
IFNA1P01562 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFNA1P01562 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.82■□□□□ 0.6
IFNA1P01562 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IFNA1P01562 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFNA1P01562 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFNA1P01562 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IFNA1P01562 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.81■□□□□ 0.6
IFNA1P01562 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFNA1P01562 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IFNA1P01562 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFNA1P01562 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFNA1P01562 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
IFNA1P01562 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFNA1P01562 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.8■□□□□ 0.6
IFNA1P01562 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFNA1P01562 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.8■□□□□ 0.6
IFNA1P01562 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFNA1P01562 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFNA1P01562 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFNA1P01562 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFNA1P01562 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
IFNA1P01562 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNA1P01562 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNA1P01562 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFNA1P01562 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.79■□□□□ 0.6
IFNA1P01562 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFNA1P01562 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNA1P01562 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNA1P01562 AC141586.4-201ENST00000624558 1573 ntBASIC18.78■□□□□ 0.6
IFNA1P01562 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
IFNA1P01562 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNA1P01562 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNA1P01562 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNA1P01562 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
IFNA1P01562 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
IFNA1P01562 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IFNA1P01562 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.77■□□□□ 0.6
IFNA1P01562 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNA1P01562 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNA1P01562 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IFNA1P01562 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNA1P01562 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNA1P01562 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IFNA1P01562 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFNA1P01562 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms