Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.94■□□□□ 0.78
SIX6O95475 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX6O95475 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX6O95475 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX6O95475 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX6O95475 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SIX6O95475 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX6O95475 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX6O95475 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX6O95475 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.92■□□□□ 0.78
SIX6O95475 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX6O95475 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SIX6O95475 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX6O95475 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX6O95475 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX6O95475 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX6O95475 AP003733.4-201ENST00000623785 1697 ntBASIC19.91■□□□□ 0.78
SIX6O95475 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX6O95475 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX6O95475 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.91■□□□□ 0.78
SIX6O95475 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.91■□□□□ 0.78
SIX6O95475 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIX6O95475 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX6O95475 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX6O95475 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SIX6O95475 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.91■□□□□ 0.78
SIX6O95475 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIX6O95475 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SIX6O95475 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.9■□□□□ 0.78
SIX6O95475 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX6O95475 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIX6O95475 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIX6O95475 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX6O95475 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX6O95475 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SIX6O95475 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIX6O95475 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SIX6O95475 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SIX6O95475 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.89■□□□□ 0.77
SIX6O95475 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX6O95475 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX6O95475 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX6O95475 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.87■□□□□ 0.77
SIX6O95475 LINC00273-201ENST00000539813 1452 ntBASIC19.87■□□□□ 0.77
SIX6O95475 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX6O95475 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX6O95475 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIX6O95475 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX6O95475 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX6O95475 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SIX6O95475 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX6O95475 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX6O95475 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX6O95475 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
SIX6O95475 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX6O95475 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX6O95475 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX6O95475 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SIX6O95475 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX6O95475 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.85■□□□□ 0.77
SIX6O95475 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SIX6O95475 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX6O95475 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX6O95475 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.84■□□□□ 0.77
SIX6O95475 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.84■□□□□ 0.77
SIX6O95475 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX6O95475 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SIX6O95475 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX6O95475 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SIX6O95475 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SIX6O95475 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX6O95475 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.83■□□□□ 0.77
SIX6O95475 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX6O95475 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SIX6O95475 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIX6O95475 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIX6O95475 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SIX6O95475 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX6O95475 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX6O95475 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX6O95475 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX6O95475 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.82■□□□□ 0.76
SIX6O95475 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX6O95475 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX6O95475 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX6O95475 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX6O95475 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIX6O95475 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX6O95475 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SIX6O95475 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.81■□□□□ 0.76
SIX6O95475 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX6O95475 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms