Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPXO76031 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CLPXO76031 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.54■■□□□ 1.04
CLPXO76031 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPXO76031 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.54■■□□□ 1.04
CLPXO76031 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLPXO76031 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
CLPXO76031 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLPXO76031 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPXO76031 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLPXO76031 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPXO76031 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLPXO76031 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CLPXO76031 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CLPXO76031 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLPXO76031 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.53■■□□□ 1.04
CLPXO76031 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLPXO76031 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CLPXO76031 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CLPXO76031 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLPXO76031 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
CLPXO76031 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
CLPXO76031 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.51■■□□□ 1.03
CLPXO76031 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLPXO76031 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CLPXO76031 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPXO76031 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPXO76031 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLPXO76031 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPXO76031 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPXO76031 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLPXO76031 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLPXO76031 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.5■■□□□ 1.03
CLPXO76031 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CLPXO76031 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLPXO76031 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLPXO76031 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.49■■□□□ 1.03
CLPXO76031 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLPXO76031 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLPXO76031 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.49■■□□□ 1.03
CLPXO76031 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLPXO76031 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CLPXO76031 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CLPXO76031 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLPXO76031 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLPXO76031 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLPXO76031 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.48■■□□□ 1.03
CLPXO76031 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CLPXO76031 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLPXO76031 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLPXO76031 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CLPXO76031 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPXO76031 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPXO76031 AC108673.1-201ENST00000510422 1159 ntBASIC21.47■■□□□ 1.03
CLPXO76031 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPXO76031 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPXO76031 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPXO76031 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPXO76031 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPXO76031 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
CLPXO76031 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPXO76031 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPXO76031 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.46■■□□□ 1.03
CLPXO76031 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.46■■□□□ 1.03
CLPXO76031 AL117328.2-201ENST00000624617 1940 ntBASIC21.46■■□□□ 1.03
CLPXO76031 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CLPXO76031 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.46■■□□□ 1.03
CLPXO76031 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPXO76031 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.45■■□□□ 1.02
CLPXO76031 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLPXO76031 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPXO76031 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CLPXO76031 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPXO76031 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPXO76031 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPXO76031 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.44■■□□□ 1.02
CLPXO76031 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.44■■□□□ 1.02
CLPXO76031 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPXO76031 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.44■■□□□ 1.02
CLPXO76031 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.44■■□□□ 1.02
CLPXO76031 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
CLPXO76031 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.44■■□□□ 1.02
CLPXO76031 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.44■■□□□ 1.02
CLPXO76031 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPXO76031 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLPXO76031 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLPXO76031 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.43■■□□□ 1.02
CLPXO76031 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CLPXO76031 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLPXO76031 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLPXO76031 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLPXO76031 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLPXO76031 AP003733.4-201ENST00000623785 1697 ntBASIC21.43■■□□□ 1.02
CLPXO76031 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLPXO76031 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLPXO76031 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLPXO76031 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CLPXO76031 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.42■■□□□ 1.02
CLPXO76031 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLPXO76031 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms