Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SCGB2A1O75556 AC020928.2-201ENST00000588717 2197 ntBASIC18.74■□□□□ 0.59
SCGB2A1O75556 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.74■□□□□ 0.59
SCGB2A1O75556 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.74■□□□□ 0.59
SCGB2A1O75556 MIR7108-201ENST00000614319 87 ntBASIC18.74■□□□□ 0.59
SCGB2A1O75556 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.74■□□□□ 0.59
SCGB2A1O75556 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SCGB2A1O75556 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCGB2A1O75556 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.74■□□□□ 0.59
SCGB2A1O75556 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCGB2A1O75556 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.73■□□□□ 0.59
SCGB2A1O75556 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.73■□□□□ 0.59
SCGB2A1O75556 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.73■□□□□ 0.59
SCGB2A1O75556 MIR3960-201ENST00000583311 91 ntBASIC18.73■□□□□ 0.59
SCGB2A1O75556 ERN1-208ENST00000606895 2068 ntBASIC18.73■□□□□ 0.59
SCGB2A1O75556 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCGB2A1O75556 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SCGB2A1O75556 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCGB2A1O75556 PKD1P6-201ENST00000343738 4769 ntBASIC18.72■□□□□ 0.59
SCGB2A1O75556 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCGB2A1O75556 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SCGB2A1O75556 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SCGB2A1O75556 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCGB2A1O75556 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.72■□□□□ 0.59
SCGB2A1O75556 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCGB2A1O75556 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCGB2A1O75556 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCGB2A1O75556 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCGB2A1O75556 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SCGB2A1O75556 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.71■□□□□ 0.59
SCGB2A1O75556 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCGB2A1O75556 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.71■□□□□ 0.59
SCGB2A1O75556 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCGB2A1O75556 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCGB2A1O75556 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCGB2A1O75556 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCGB2A1O75556 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.71■□□□□ 0.59
SCGB2A1O75556 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCGB2A1O75556 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SCGB2A1O75556 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SCGB2A1O75556 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCGB2A1O75556 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCGB2A1O75556 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SCGB2A1O75556 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCGB2A1O75556 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCGB2A1O75556 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.7■□□□□ 0.58
SCGB2A1O75556 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCGB2A1O75556 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.7■□□□□ 0.58
SCGB2A1O75556 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.7■□□□□ 0.58
SCGB2A1O75556 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCGB2A1O75556 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.7■□□□□ 0.58
SCGB2A1O75556 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCGB2A1O75556 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCGB2A1O75556 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCGB2A1O75556 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCGB2A1O75556 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SCGB2A1O75556 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SCGB2A1O75556 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SCGB2A1O75556 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.69■□□□□ 0.58
SCGB2A1O75556 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCGB2A1O75556 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SCGB2A1O75556 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.69■□□□□ 0.58
SCGB2A1O75556 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCGB2A1O75556 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.69■□□□□ 0.58
SCGB2A1O75556 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCGB2A1O75556 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SCGB2A1O75556 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCGB2A1O75556 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SCGB2A1O75556 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCGB2A1O75556 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.68■□□□□ 0.58
SCGB2A1O75556 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCGB2A1O75556 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCGB2A1O75556 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCGB2A1O75556 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.68■□□□□ 0.58
SCGB2A1O75556 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCGB2A1O75556 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCGB2A1O75556 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.67■□□□□ 0.58
SCGB2A1O75556 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SCGB2A1O75556 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SCGB2A1O75556 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.67■□□□□ 0.58
SCGB2A1O75556 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCGB2A1O75556 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.66■□□□□ 0.58
SCGB2A1O75556 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCGB2A1O75556 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCGB2A1O75556 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCGB2A1O75556 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.66■□□□□ 0.58
SCGB2A1O75556 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.65■□□□□ 0.58
SCGB2A1O75556 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.65■□□□□ 0.58
SCGB2A1O75556 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SCGB2A1O75556 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SCGB2A1O75556 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms