Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC097639.1-201ENST00000565519 1891 ntBASIC16.22■□□□□ 0.19
NDUFA1O15239 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 AP003733.4-201ENST00000623785 1697 ntBASIC16.22■□□□□ 0.19
NDUFA1O15239 AC079834.2-201ENST00000609776 1949 ntBASIC16.22■□□□□ 0.19
NDUFA1O15239 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NDUFA1O15239 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFA1O15239 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFA1O15239 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 LINC01971-201ENST00000617888 1048 ntBASIC16.22■□□□□ 0.19
NDUFA1O15239 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFA1O15239 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.21■□□□□ 0.19
NDUFA1O15239 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFA1O15239 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NDUFA1O15239 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDUFA1O15239 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.21■□□□□ 0.18
NDUFA1O15239 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
NDUFA1O15239 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
NDUFA1O15239 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFA1O15239 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFA1O15239 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.2■□□□□ 0.18
NDUFA1O15239 AC096887.2-201ENST00000623443 1957 ntBASIC16.2■□□□□ 0.18
NDUFA1O15239 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.2■□□□□ 0.18
NDUFA1O15239 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NDUFA1O15239 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA1O15239 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA1O15239 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA1O15239 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA1O15239 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.19■□□□□ 0.18
NDUFA1O15239 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.19■□□□□ 0.18
NDUFA1O15239 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA1O15239 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NDUFA1O15239 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 AC008813.1-201ENST00000536597 885 ntBASIC16.18■□□□□ 0.18
NDUFA1O15239 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA1O15239 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NDUFA1O15239 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFA1O15239 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.16■□□□□ 0.18
NDUFA1O15239 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFA1O15239 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFA1O15239 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L13-201ENST00000554103 1267 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L15-201ENST00000611059 1267 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L23-201ENST00000615195 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L24-201ENST00000617576 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L22-201ENST00000618238 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L20-201ENST00000619712 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L21-201ENST00000622058 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L10-201ENST00000622460 1267 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L25-201ENST00000624915 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NDUFA1O15239 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NDUFA1O15239 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NDUFA1O15239 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFA1O15239 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NDUFA1O15239 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFA1O15239 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFA1O15239 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFA1O15239 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms