Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH17O14917 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH17O14917 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH17O14917 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH17O14917 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH17O14917 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH17O14917 SPCS2P3-201ENST00000500401 656 ntBASIC22.72■■□□□ 1.23
PCDH17O14917 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH17O14917 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH17O14917 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
PCDH17O14917 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PCDH17O14917 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PCDH17O14917 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH17O14917 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH17O14917 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH17O14917 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH17O14917 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH17O14917 AC139795.1-202ENST00000500444 432 ntBASIC22.7■■□□□ 1.22
PCDH17O14917 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH17O14917 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
PCDH17O14917 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH17O14917 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH17O14917 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH17O14917 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH17O14917 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH17O14917 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH17O14917 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH17O14917 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH17O14917 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PCDH17O14917 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH17O14917 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH17O14917 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
PCDH17O14917 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH17O14917 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PCDH17O14917 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH17O14917 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH17O14917 BHLHE23-202ENST00000612929 1109 ntBASIC22.68■■□□□ 1.22
PCDH17O14917 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
PCDH17O14917 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH17O14917 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PCDH17O14917 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH17O14917 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
PCDH17O14917 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDH17O14917 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH17O14917 RARRES2P1-201ENST00000474487 481 ntBASIC22.67■■□□□ 1.22
PCDH17O14917 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH17O14917 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH17O14917 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDH17O14917 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH17O14917 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PCDH17O14917 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH17O14917 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDH17O14917 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH17O14917 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH17O14917 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDH17O14917 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDH17O14917 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
PCDH17O14917 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH17O14917 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH17O14917 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH17O14917 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH17O14917 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH17O14917 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDH17O14917 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
PCDH17O14917 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH17O14917 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDH17O14917 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH17O14917 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDH17O14917 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH17O14917 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH17O14917 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
PCDH17O14917 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH17O14917 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH17O14917 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH17O14917 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH17O14917 AC019171.1-201ENST00000601251 1056 ntBASIC22.63■■□□□ 1.21
PCDH17O14917 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH17O14917 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH17O14917 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH17O14917 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH17O14917 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH17O14917 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH17O14917 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
PCDH17O14917 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH17O14917 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH17O14917 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH17O14917 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH17O14917 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH17O14917 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH17O14917 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH17O14917 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH17O14917 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.61■■□□□ 1.21
PCDH17O14917 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
PCDH17O14917 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH17O14917 AC087393.1-201ENST00000582896 145 ntBASIC22.61■■□□□ 1.21
PCDH17O14917 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH17O14917 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH17O14917 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH17O14917 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH17O14917 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms