Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.01■■□□□ 1.11
TNFRSF11BO00300 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TNFRSF11BO00300 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNFRSF11BO00300 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22■■□□□ 1.11
TNFRSF11BO00300 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22■■□□□ 1.11
TNFRSF11BO00300 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22■■□□□ 1.11
TNFRSF11BO00300 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22■■□□□ 1.11
TNFRSF11BO00300 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22■■□□□ 1.11
TNFRSF11BO00300 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22■■□□□ 1.11
TNFRSF11BO00300 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNFRSF11BO00300 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNFRSF11BO00300 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
TNFRSF11BO00300 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 HLA-V-202ENST00000446817 847 ntBASIC21.99■■□□□ 1.11
TNFRSF11BO00300 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TNFRSF11BO00300 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF11BO00300 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF11BO00300 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF11BO00300 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.98■■□□□ 1.11
TNFRSF11BO00300 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF11BO00300 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF11BO00300 SLC6A10P-202ENST00000431994 2058 ntBASIC21.98■■□□□ 1.11
TNFRSF11BO00300 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF11BO00300 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF11BO00300 DUX4L11-201ENST00000611504 1267 ntBASIC21.97■■□□□ 1.11
TNFRSF11BO00300 DUX4L12-201ENST00000614593 1267 ntBASIC21.97■■□□□ 1.11
TNFRSF11BO00300 DUX4L14-201ENST00000621227 1267 ntBASIC21.97■■□□□ 1.11
TNFRSF11BO00300 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF11BO00300 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.97■■□□□ 1.11
TNFRSF11BO00300 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF11BO00300 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF11BO00300 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF11BO00300 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.96■■□□□ 1.11
TNFRSF11BO00300 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TNFRSF11BO00300 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TNFRSF11BO00300 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TNFRSF11BO00300 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
TNFRSF11BO00300 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TNFRSF11BO00300 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TNFRSF11BO00300 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFRSF11BO00300 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFRSF11BO00300 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFRSF11BO00300 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.95■■□□□ 1.1
TNFRSF11BO00300 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
TNFRSF11BO00300 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNFRSF11BO00300 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TNFRSF11BO00300 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFRSF11BO00300 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFRSF11BO00300 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.92■■□□□ 1.1
TNFRSF11BO00300 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFRSF11BO00300 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFRSF11BO00300 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFRSF11BO00300 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TNFRSF11BO00300 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 LINC00543-201ENST00000567234 1845 ntBASIC21.91■■□□□ 1.1
TNFRSF11BO00300 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TNFRSF11BO00300 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNFRSF11BO00300 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNFRSF11BO00300 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.9■■□□□ 1.1
TNFRSF11BO00300 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
TNFRSF11BO00300 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TNFRSF11BO00300 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNFRSF11BO00300 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNFRSF11BO00300 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TNFRSF11BO00300 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.89■■□□□ 1.09
TNFRSF11BO00300 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms