Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCP4L1A6NKN8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCP4L1A6NKN8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PCP4L1A6NKN8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCP4L1A6NKN8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCP4L1A6NKN8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCP4L1A6NKN8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCP4L1A6NKN8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCP4L1A6NKN8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.9■□□□□ 0.62
PCP4L1A6NKN8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.9■□□□□ 0.62
PCP4L1A6NKN8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.9■□□□□ 0.62
PCP4L1A6NKN8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCP4L1A6NKN8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.9■□□□□ 0.62
PCP4L1A6NKN8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCP4L1A6NKN8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCP4L1A6NKN8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.89■□□□□ 0.61
PCP4L1A6NKN8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.89■□□□□ 0.61
PCP4L1A6NKN8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCP4L1A6NKN8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCP4L1A6NKN8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCP4L1A6NKN8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.88■□□□□ 0.61
PCP4L1A6NKN8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCP4L1A6NKN8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCP4L1A6NKN8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
PCP4L1A6NKN8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
PCP4L1A6NKN8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCP4L1A6NKN8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCP4L1A6NKN8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCP4L1A6NKN8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCP4L1A6NKN8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCP4L1A6NKN8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCP4L1A6NKN8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCP4L1A6NKN8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.85■□□□□ 0.61
PCP4L1A6NKN8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCP4L1A6NKN8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCP4L1A6NKN8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCP4L1A6NKN8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms