Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17■□□□□ 0.31
LINC01546A6NGU7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01546A6NGU7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LINC01546A6NGU7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01546A6NGU7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01546A6NGU7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01546A6NGU7 AC108673.1-201ENST00000510422 1159 ntBASIC17■□□□□ 0.31
LINC01546A6NGU7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17■□□□□ 0.31
LINC01546A6NGU7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01546A6NGU7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LINC01546A6NGU7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01546A6NGU7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 CAHM-201ENST00000604200 896 ntBASIC16.99■□□□□ 0.31
LINC01546A6NGU7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01546A6NGU7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 AC004812.2-201ENST00000611079 2094 ntBASIC16.98■□□□□ 0.31
LINC01546A6NGU7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01546A6NGU7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.97■□□□□ 0.31
LINC01546A6NGU7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
LINC01546A6NGU7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
LINC01546A6NGU7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01546A6NGU7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LINC01546A6NGU7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.96■□□□□ 0.31
LINC01546A6NGU7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LINC01546A6NGU7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01546A6NGU7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LINC01546A6NGU7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01546A6NGU7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC01546A6NGU7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01546A6NGU7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01546A6NGU7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01546A6NGU7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01546A6NGU7 RARRES2P7-201ENST00000567349 469 ntBASIC16.95■□□□□ 0.3
LINC01546A6NGU7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC01546A6NGU7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01546A6NGU7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01546A6NGU7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01546A6NGU7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01546A6NGU7 MIR762-201ENST00000390236 83 ntBASIC16.94■□□□□ 0.3
LINC01546A6NGU7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01546A6NGU7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LINC01546A6NGU7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01546A6NGU7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LINC01546A6NGU7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01546A6NGU7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01546A6NGU7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LINC01546A6NGU7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01546A6NGU7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.92■□□□□ 0.3
LINC01546A6NGU7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.92■□□□□ 0.3
LINC01546A6NGU7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.92■□□□□ 0.3
LINC01546A6NGU7 MIR6090-201ENST00000622481 60 ntBASIC16.92■□□□□ 0.3
LINC01546A6NGU7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC01546A6NGU7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC01546A6NGU7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LINC01546A6NGU7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01546A6NGU7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01546A6NGU7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01546A6NGU7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01546A6NGU7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC01546A6NGU7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01546A6NGU7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01546A6NGU7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LINC01546A6NGU7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
LINC01546A6NGU7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC01546A6NGU7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms