Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV4A0A0C4DH28 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV4A0A0C4DH28 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV4A0A0C4DH28 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRGV4A0A0C4DH28 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV4A0A0C4DH28 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV4A0A0C4DH28 AC093536.1-201ENST00000569153 554 ntBASIC17.05■□□□□ 0.32
TRGV4A0A0C4DH28 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV4A0A0C4DH28 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 AC007029.1-201ENST00000604183 313 ntBASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV4A0A0C4DH28 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV4A0A0C4DH28 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.02■□□□□ 0.32
TRGV4A0A0C4DH28 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV4A0A0C4DH28 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRGV4A0A0C4DH28 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV4A0A0C4DH28 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TRGV4A0A0C4DH28 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
TRGV4A0A0C4DH28 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.02■□□□□ 0.32
TRGV4A0A0C4DH28 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV4A0A0C4DH28 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.02■□□□□ 0.31
TRGV4A0A0C4DH28 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRGV4A0A0C4DH28 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 RNF126P1-201ENST00000567452 1320 ntBASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV4A0A0C4DH28 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TRGV4A0A0C4DH28 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 AC096887.2-201ENST00000623443 1957 ntBASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV4A0A0C4DH28 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 AC020928.2-201ENST00000588717 2197 ntBASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.98■□□□□ 0.31
TRGV4A0A0C4DH28 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV4A0A0C4DH28 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.97■□□□□ 0.31
TRGV4A0A0C4DH28 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV4A0A0C4DH28 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV4A0A0C4DH28 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV4A0A0C4DH28 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV4A0A0C4DH28 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV4A0A0C4DH28 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms