Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV8-1A0A0A6YYK1 AL359258.2-201ENST00000564063 1566 ntBASIC18.05■□□□□ 0.48
TRAV8-1A0A0A6YYK1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV8-1A0A0A6YYK1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV8-1A0A0A6YYK1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-1A0A0A6YYK1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-1A0A0A6YYK1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-1A0A0A6YYK1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-1A0A0A6YYK1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-1A0A0A6YYK1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRAV8-1A0A0A6YYK1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-1A0A0A6YYK1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-1A0A0A6YYK1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-1A0A0A6YYK1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 AC008813.1-201ENST00000536597 885 ntBASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 LINC01971-201ENST00000617888 1048 ntBASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-1A0A0A6YYK1 AP003733.4-201ENST00000623785 1697 ntBASIC18.02■□□□□ 0.47
TRAV8-1A0A0A6YYK1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV8-1A0A0A6YYK1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-1A0A0A6YYK1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 SLC6A10P-202ENST00000431994 2058 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L13-201ENST00000554103 1267 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L15-201ENST00000611059 1267 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L23-201ENST00000615195 1269 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L24-201ENST00000617576 1269 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L22-201ENST00000618238 1269 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L20-201ENST00000619712 1269 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L21-201ENST00000622058 1269 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L10-201ENST00000622460 1267 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 AC148477.6-201ENST00000623746 465 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 DUX4L25-201ENST00000624915 1269 ntBASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-1A0A0A6YYK1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 AC097639.1-201ENST00000565519 1891 ntBASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-1A0A0A6YYK1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-1A0A0A6YYK1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV8-1A0A0A6YYK1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRAV8-1A0A0A6YYK1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV8-1A0A0A6YYK1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-1A0A0A6YYK1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms