Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB11Q9Y5F2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 CROCCP1-201ENST00000426910 5675 ntBASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 KRT8P49-201ENST00000604166 1432 ntBASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 FLJ38576-201ENST00000623820 2459 ntBASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 PCDHA14-201ENST00000506751 2298 ntBASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 OR7E47P-204ENST00000575924 449 ntBASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 REXO1L3P-201ENST00000622202 1288 ntBASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 TOP3BP1-201ENST00000420768 1380 ntBASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHB11Q9Y5F2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 AC025678.2-201ENST00000562061 970 ntBASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB11Q9Y5F2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 TNRC18P3-201ENST00000441896 2691 ntBASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 AC017007.3-201ENST00000479865 435 ntBASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB11Q9Y5F2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms