Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 FAM207CP-201ENST00000443486 507 ntBASIC17.34■□□□□ 0.37
YIPF1Q9Y548 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AC004890.2-204ENST00000481968 304 ntBASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AC098859.1-201ENST00000502915 1238 ntBASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AL138828.2-201ENST00000615812 383 ntBASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AL512652.2-201ENST00000625156 1716 ntBASIC17.34■□□□□ 0.37
YIPF1Q9Y548 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
YIPF1Q9Y548 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
YIPF1Q9Y548 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 TSSK5P-201ENST00000423978 907 ntBASIC17.33■□□□□ 0.36
YIPF1Q9Y548 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 RNA5SP410-201ENST00000516285 106 ntBASIC17.33■□□□□ 0.36
YIPF1Q9Y548 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
YIPF1Q9Y548 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 AL035456.1-201ENST00000456064 1369 ntBASIC17.32■□□□□ 0.36
YIPF1Q9Y548 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 HLA-V-204ENST00000476601 1289 ntBASIC17.32■□□□□ 0.36
YIPF1Q9Y548 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms