Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLIP2Q9UDT6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 AL353732.1-201ENST00000569618 1459 ntBASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 LINC02012-201ENST00000608206 1725 ntBASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 AC002056.1-201ENST00000395613 760 ntBASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIP2Q9UDT6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 SLC22A20-204ENST00000530038 1673 ntBASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 AC092053.1-201ENST00000605787 1936 ntBASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 PMS2P2-201ENST00000425039 1128 ntBASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 CROCCP1-201ENST00000426910 5675 ntBASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIP2Q9UDT6 KRT18P28-201ENST00000453838 1332 ntBASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 OR6D1P-203ENST00000641209 4860 ntBASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms