Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC010654.1-201ENST00000615722 808 ntBASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 AC105020.1-201ENST00000435356 2205 ntBASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.09□□□□□ -0.15
PCGF1Q9BSM1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.08□□□□□ -0.15
PCGF1Q9BSM1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.08□□□□□ -0.15
PCGF1Q9BSM1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PCGF1Q9BSM1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.08□□□□□ -0.15
PCGF1Q9BSM1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.08□□□□□ -0.15
PCGF1Q9BSM1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PCGF1Q9BSM1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCGF1Q9BSM1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 MIR1233-2-201ENST00000408138 82 ntBASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 MIR1233-1-201ENST00000408722 82 ntBASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 PRSS29P-201ENST00000440800 595 ntBASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 AC018845.2-201ENST00000568326 409 ntBASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 AC002347.1-201ENST00000569543 541 ntBASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 LINC02199-201ENST00000506655 2702 ntBASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
PCGF1Q9BSM1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 AC093525.9-201ENST00000624961 1746 ntBASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.07□□□□□ -0.16
PCGF1Q9BSM1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms