Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AC008894.3-201ENST00000624324 3103 ntBASIC13.06□□□□□ -0.32
TRGV9Q99603 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV9Q99603 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 AL671710.1-201ENST00000610245 2349 ntBASIC13.06□□□□□ -0.32
TRGV9Q99603 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV9Q99603 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRGV9Q99603 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.06□□□□□ -0.32
TRGV9Q99603 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRGV9Q99603 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 RBM17P3-201ENST00000417687 1192 ntBASIC13.06□□□□□ -0.32
TRGV9Q99603 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.06□□□□□ -0.32
TRGV9Q99603 ATP5G2P1-201ENST00000433580 426 ntBASIC13.06□□□□□ -0.32
TRGV9Q99603 AC132008.2-207ENST00000454517 770 ntBASIC13.06□□□□□ -0.32
TRGV9Q99603 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 KRT18P21-201ENST00000515767 1272 ntBASIC13.06□□□□□ -0.32
TRGV9Q99603 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.06□□□□□ -0.32
TRGV9Q99603 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 AF228730.7-201ENST00000641842 219 ntBASIC13.06□□□□□ -0.32
TRGV9Q99603 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV9Q99603 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
TRGV9Q99603 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRGV9Q99603 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV9Q99603 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRGV9Q99603 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV9Q99603 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 GGT4P-201ENST00000623672 1708 ntBASIC13.05□□□□□ -0.32
TRGV9Q99603 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRGV9Q99603 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRGV9Q99603 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.05□□□□□ -0.32
TRGV9Q99603 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 NKAPP1-205ENST00000585790 367 ntBASIC13.05□□□□□ -0.32
TRGV9Q99603 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV9Q99603 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV9Q99603 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
TRGV9Q99603 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV9Q99603 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV9Q99603 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV9Q99603 AL031731.1-201ENST00000642131 2094 ntBASIC13.04□□□□□ -0.32
TRGV9Q99603 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms