Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.3
PHOX2BQ99453 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.89■□□□□ 0.3
PHOX2BQ99453 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 MIR346-201ENST00000362234 95 ntBASIC16.89■□□□□ 0.29
PHOX2BQ99453 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 AC087163.2-201ENST00000457299 853 ntBASIC16.89■□□□□ 0.29
PHOX2BQ99453 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.89■□□□□ 0.29
PHOX2BQ99453 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHOX2BQ99453 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 MIR663B-201ENST00000408361 115 ntBASIC16.88■□□□□ 0.29
PHOX2BQ99453 AC087499.6-201ENST00000411576 835 ntBASIC16.88■□□□□ 0.29
PHOX2BQ99453 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHOX2BQ99453 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PHOX2BQ99453 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.88■□□□□ 0.29
PHOX2BQ99453 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 HMGA1P7-201ENST00000406908 502 ntBASIC16.87■□□□□ 0.29
PHOX2BQ99453 HLA-V-204ENST00000476601 1289 ntBASIC16.87■□□□□ 0.29
PHOX2BQ99453 AC135586.1-201ENST00000539323 574 ntBASIC16.87■□□□□ 0.29
PHOX2BQ99453 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 AL009183.1-201ENST00000603760 355 ntBASIC16.87■□□□□ 0.29
PHOX2BQ99453 AC018529.1-201ENST00000613063 361 ntBASIC16.87■□□□□ 0.29
PHOX2BQ99453 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 AC008267.7-201ENST00000624570 1194 ntBASIC16.87■□□□□ 0.29
PHOX2BQ99453 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PHOX2BQ99453 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHOX2BQ99453 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms