Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP53Q96M91 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC22.29■■□□□ 1.16
CFAP53Q96M91 INO80E-210ENST00000567705 880 ntTSL 3 BASIC22.29■■□□□ 1.16
CFAP53Q96M91 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.29■■□□□ 1.16
CFAP53Q96M91 AC004835.2-201ENST00000603762 682 ntBASIC22.29■■□□□ 1.16
CFAP53Q96M91 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP53Q96M91 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CFAP53Q96M91 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.29■■□□□ 1.16
CFAP53Q96M91 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP53Q96M91 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP53Q96M91 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP53Q96M91 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP53Q96M91 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP53Q96M91 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CFAP53Q96M91 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC22.29■■□□□ 1.16
CFAP53Q96M91 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CFAP53Q96M91 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 AC106886.4-201ENST00000623557 2502 ntBASIC22.28■■□□□ 1.16
CFAP53Q96M91 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CFAP53Q96M91 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC22.28■■□□□ 1.16
CFAP53Q96M91 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 AL031731.1-201ENST00000642131 2094 ntBASIC22.27■■□□□ 1.16
CFAP53Q96M91 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC22.27■■□□□ 1.16
CFAP53Q96M91 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP53Q96M91 AD000864.1-201ENST00000624076 2295 ntBASIC22.27■■□□□ 1.16
CFAP53Q96M91 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 HLA-A-202ENST00000376806 1854 ntBASIC22.26■■□□□ 1.15
CFAP53Q96M91 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 AL592309.1-201ENST00000443127 649 ntBASIC22.26■■□□□ 1.15
CFAP53Q96M91 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP53Q96M91 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
CFAP53Q96M91 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms