Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC003101.2-201ENST00000612557 442 ntBASIC19.38■□□□□ 0.69
CCDC17Q96LX7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.37■□□□□ 0.69
CCDC17Q96LX7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.37■□□□□ 0.69
CCDC17Q96LX7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 AC093724.1-201ENST00000448659 1027 ntBASIC19.37■□□□□ 0.69
CCDC17Q96LX7 INGX-202ENST00000489074 768 ntBASIC19.37■□□□□ 0.69
CCDC17Q96LX7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 AL031731.1-201ENST00000642131 2094 ntBASIC19.37■□□□□ 0.69
CCDC17Q96LX7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC17Q96LX7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 AL035456.1-201ENST00000456064 1369 ntBASIC19.36■□□□□ 0.69
CCDC17Q96LX7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC17Q96LX7 AL603756.1-201ENST00000606511 2163 ntBASIC19.36■□□□□ 0.69
CCDC17Q96LX7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 AL353705.2-201ENST00000428243 662 ntBASIC19.35■□□□□ 0.69
CCDC17Q96LX7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 IGHV3-42-201ENST00000520410 361 ntBASIC19.35■□□□□ 0.69
CCDC17Q96LX7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC17Q96LX7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 GGT4P-201ENST00000623672 1708 ntBASIC19.34■□□□□ 0.69
CCDC17Q96LX7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC17Q96LX7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms