Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 AC013467.2-201ENST00000605472 835 ntBASIC12.79□□□□□ -0.36
SMIM12Q96EX1 AC092666.2-201ENST00000613287 246 ntBASIC12.79□□□□□ -0.36
SMIM12Q96EX1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 FAM45BP-202ENST00000592932 1624 ntBASIC12.79□□□□□ -0.36
SMIM12Q96EX1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 AL161772.1-201ENST00000610494 4412 ntBASIC12.79□□□□□ -0.36
SMIM12Q96EX1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 CICP4-201ENST00000447359 2812 ntBASIC12.79□□□□□ -0.36
SMIM12Q96EX1 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 ID1-201ENST00000376105 1233 ntBASIC12.78□□□□□ -0.36
SMIM12Q96EX1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 AC005332.3-201ENST00000589904 676 ntBASIC12.78□□□□□ -0.36
SMIM12Q96EX1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SMIM12Q96EX1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 AC006449.6-201ENST00000612330 2296 ntBASIC12.77□□□□□ -0.36
SMIM12Q96EX1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 GGT4P-201ENST00000623672 1708 ntBASIC12.77□□□□□ -0.36
SMIM12Q96EX1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.77□□□□□ -0.36
SMIM12Q96EX1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms