Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 AC005593.1-201ENST00000624894 515 ntBASIC17.02■□□□□ 0.32
RTP4Q96DX8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTP4Q96DX8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTP4Q96DX8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTP4Q96DX8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTP4Q96DX8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTP4Q96DX8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.02■□□□□ 0.31
RTP4Q96DX8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.02■□□□□ 0.31
RTP4Q96DX8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.02■□□□□ 0.31
RTP4Q96DX8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTP4Q96DX8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RTP4Q96DX8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RTP4Q96DX8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 AC020765.3-201ENST00000613051 740 ntBASIC17.01■□□□□ 0.31
RTP4Q96DX8 AC116407.3-201ENST00000623905 1129 ntBASIC17.01■□□□□ 0.31
RTP4Q96DX8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTP4Q96DX8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.01■□□□□ 0.31
RTP4Q96DX8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17■□□□□ 0.31
RTP4Q96DX8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17■□□□□ 0.31
RTP4Q96DX8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RTP4Q96DX8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTP4Q96DX8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17■□□□□ 0.31
RTP4Q96DX8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RTP4Q96DX8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 AC079328.2-201ENST00000561241 3354 ntBASIC17■□□□□ 0.31
RTP4Q96DX8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTP4Q96DX8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 AC007950.2-201ENST00000615045 2347 ntBASIC17■□□□□ 0.31
RTP4Q96DX8 AC004790.2-201ENST00000623588 572 ntBASIC17■□□□□ 0.31
RTP4Q96DX8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 AC012569.1-201ENST00000591191 1524 ntBASIC17■□□□□ 0.31
RTP4Q96DX8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RTP4Q96DX8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17■□□□□ 0.31
RTP4Q96DX8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RTP4Q96DX8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.99■□□□□ 0.31
RTP4Q96DX8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.99■□□□□ 0.31
RTP4Q96DX8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.99■□□□□ 0.31
RTP4Q96DX8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RTP4Q96DX8 KRT18P13-201ENST00000400056 1290 ntBASIC16.99■□□□□ 0.31
RTP4Q96DX8 PRSS29P-201ENST00000440800 595 ntBASIC16.99■□□□□ 0.31
RTP4Q96DX8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.99■□□□□ 0.31
RTP4Q96DX8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTP4Q96DX8 POLD2P1-201ENST00000511220 997 ntBASIC16.99■□□□□ 0.31
RTP4Q96DX8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms