Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASKIN1Q8WXD9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CASKIN1Q8WXD9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC25.58■■□□□ 1.68
CASKIN1Q8WXD9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CASKIN1Q8WXD9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CASKIN1Q8WXD9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 MIR4321-201ENST00000592276 80 ntBASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASKIN1Q8WXD9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 EEF1DP4-201ENST00000446006 880 ntBASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASKIN1Q8WXD9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 5S_rRNA.22-201ENST00000614916 106 ntBASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 CEP83-AS1-201ENST00000623122 2482 ntBASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 CU639417.3-201ENST00000624240 1404 ntBASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.55■■□□□ 1.68
CASKIN1Q8WXD9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 HIST3H2BA-201ENST00000436555 524 ntBASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 GNAQP1-201ENST00000444815 1067 ntBASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 AC093004.1-201ENST00000508850 424 ntBASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC25.54■■□□□ 1.68
CASKIN1Q8WXD9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms