Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PMPCAP1-201ENST00000508114 1576 ntBASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 AC009336.1-201ENST00000608941 1553 ntBASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 AL365203.3-201ENST00000609742 2057 ntBASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTN4IP1Q8WWV3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 ABCD1P5-201ENST00000445663 754 ntBASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 PRELID1P1-202ENST00000567272 903 ntBASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 AL121772.3-201ENST00000610840 674 ntBASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTN4IP1Q8WWV3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms