Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.14■□□□□ 0.01
APH1BQ8WW43 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1BQ8WW43 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1BQ8WW43 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
APH1BQ8WW43 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.14■□□□□ 0.01
APH1BQ8WW43 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1BQ8WW43 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.14■□□□□ 0.01
APH1BQ8WW43 AC069224.1-201ENST00000566372 1715 ntBASIC15.14■□□□□ 0.01
APH1BQ8WW43 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.14■□□□□ 0.01
APH1BQ8WW43 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
APH1BQ8WW43 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.14■□□□□ 0.01
APH1BQ8WW43 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1BQ8WW43 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.14■□□□□ 0.01
APH1BQ8WW43 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1BQ8WW43 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 AC117947.1-201ENST00000427448 529 ntBASIC15.13■□□□□ 0.01
APH1BQ8WW43 LIN28AP1-201ENST00000429574 405 ntBASIC15.13■□□□□ 0.01
APH1BQ8WW43 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 PMPCAP1-201ENST00000508114 1576 ntBASIC15.13■□□□□ 0.01
APH1BQ8WW43 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 AC009533.2-201ENST00000543664 586 ntBASIC15.13■□□□□ 0.01
APH1BQ8WW43 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 AC011840.4-201ENST00000578471 627 ntBASIC15.13■□□□□ 0.01
APH1BQ8WW43 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.13■□□□□ 0.01
APH1BQ8WW43 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APH1BQ8WW43 AC016027.1-202ENST00000607927 1699 ntBASIC15.12■□□□□ 0.01
APH1BQ8WW43 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 AC243591.1-201ENST00000452967 1364 ntBASIC15.12■□□□□ 0.01
APH1BQ8WW43 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 ATP5G1P1-201ENST00000448724 379 ntBASIC15.12■□□□□ 0.01
APH1BQ8WW43 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 AC091607.1-201ENST00000490318 1060 ntBASIC15.12■□□□□ 0.01
APH1BQ8WW43 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.12■□□□□ 0.01
APH1BQ8WW43 AC023157.3-201ENST00000619086 2088 ntBASIC15.12■□□□□ 0.01
APH1BQ8WW43 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APH1BQ8WW43 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.11■□□□□ 0.01
APH1BQ8WW43 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms