Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 KRT8P49-201ENST00000604166 1432 ntBASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 IL9RP2-201ENST00000423948 1312 ntBASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AC108751.1-201ENST00000490852 363 ntBASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AC093909.1-201ENST00000504731 1122 ntBASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SIMC1Q8NDZ2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 AL391256.1-201ENST00000443260 1855 ntBASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SIMC1Q8NDZ2 SLC22A20-204ENST00000530038 1673 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms