Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 AL031731.1-201ENST00000642131 2094 ntBASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 AC051619.7-201ENST00000568314 623 ntBASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 AC008677.1-201ENST00000519230 1561 ntBASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC60Q8IWA6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 CNN2P2-201ENST00000443536 909 ntBASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 CNN2P3-201ENST00000450201 906 ntBASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 AL136317.3-201ENST00000618497 906 ntBASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 GGT4P-201ENST00000623672 1708 ntBASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC60Q8IWA6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 DUX4L27-201ENST00000554796 1261 ntBASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms